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Protein
Submitted name:

Putative two-component response regulator with GGDEF sensory box protein

Gene

RL1730

Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-1766-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative two-component response regulator with GGDEF sensory box proteinImported
Gene namesi
Ordered Locus Names:RL1730Imported
OrganismiRhizobium leguminosarum bv. viciae (strain 3841)Imported
Taxonomic identifieri216596 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000006575 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi216596.RL1730.

Structurei

3D structure databases

ProteinModelPortaliQ1MII5.
SMRiQ1MII5. Positions 2-457.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains GGDEF domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000167204.
KOiK02488.
OMAiIRRKRYN.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00990. GGDEF. 1 hit.
PF00072. Response_reg. 2 hits.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
SM00448. REC. 2 hits.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 2 hits.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
PS50110. RESPONSE_REGULATORY. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1MII5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTARILVVDD IPANVKLLEA RLLAEYFDVM TAADGYTALA ICERNQVDLI
60 70 80 90 100
LLDIMMPGID GFEVCERLKA SQKTAHIPVV MVTALDQPTD RVRGLKAGAD
110 120 130 140 150
DFLTKPVNDL QLISRVKSLL RLKTLSDELR IRADTAHTMG IDDLTRAGEG
160 170 180 190 200
RADETAQVLL VDGRANSQER IIKALKPVAD VLALSDPQAA LFEAAESAFD
210 220 230 240 250
LVIVNANFDD YDPLRLCSQL RSLERTRFLP ILIITEQGAD EMVVRALDLG
260 270 280 290 300
VNDYIIRPVD PNELVARSLT QIRRKRYNDR LRASVKQTIE LAVTDPLTGL
310 320 330 340 350
YNRRYLDNHL NVLFNRSMAR GRPLSVLITD IDRFKHVNDT YGHDGGDEVL
360 370 380 390 400
REFSNRVRST IRGADLACRY GGEEFVVVMP DTSPEIAAAV AERLRAAIEN
410 420 430 440 450
APFMLKHAGE ALNVTASFGI ASRITSVLTP DQLMKQADLA LYEAKNTGRN

RVVAAAA
Length:457
Mass (Da):50,576
Last modified:May 30, 2006 - v1
Checksum:i74B629DFC0055245
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM236080 Genomic DNA. Translation: CAK07225.1.
RefSeqiWP_011651390.1. NC_008380.1.

Genome annotation databases

EnsemblBacteriaiCAK07225; CAK07225; RL1730.
KEGGirle:RL1730.
PATRICi23140023. VBIRhiLeg32091_2949.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM236080 Genomic DNA. Translation: CAK07225.1.
RefSeqiWP_011651390.1. NC_008380.1.

3D structure databases

ProteinModelPortaliQ1MII5.
SMRiQ1MII5. Positions 2-457.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216596.RL1730.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK07225; CAK07225; RL1730.
KEGGirle:RL1730.
PATRICi23140023. VBIRhiLeg32091_2949.

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000167204.
KOiK02488.
OMAiIRRKRYN.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-1766-MONOMER.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00990. GGDEF. 1 hit.
PF00072. Response_reg. 2 hits.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
SM00448. REC. 2 hits.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 2 hits.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
PS50110. RESPONSE_REGULATORY. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3841Imported.

Entry informationi

Entry nameiQ1MII5_RHIL3
AccessioniPrimary (citable) accession number: Q1MII5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: July 22, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.