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Q1MIC3

- RL30_RHIL3

UniProt

Q1MIC3 - RL30_RHIL3

Protein

50S ribosomal protein L30

Gene

rpmD

Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciRLEG216596:GKE5-1832-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L30UniRule annotation
    Gene namesi
    Name:rpmDUniRule annotation
    Ordered Locus Names:RL1792
    OrganismiRhizobium leguminosarum bv. viciae (strain 3841)
    Taxonomic identifieri216596 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
    ProteomesiUP000006575: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 696950S ribosomal protein L30PRO_0000347135Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi216596.RL1792.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1MIC3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L30P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1841.
    HOGENOMiHOG000039916.
    KOiK02907.
    OMAiCVRGMIA.
    OrthoDBiEOG6BGP7P.

    Family and domain databases

    Gene3Di3.30.1390.20. 1 hit.
    HAMAPiMF_01371_B. Ribosomal_L30_B.
    InterProiIPR005996. Ribosomal_L30_bac-type.
    IPR016082. Ribosomal_L30_ferredoxin-like.
    [Graphical view]
    PfamiPF00327. Ribosomal_L30. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
    SUPFAMiSSF55129. SSF55129. 1 hit.
    TIGRFAMsiTIGR01308. rpmD_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1MIC3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKATKKAEA KTVTIEQIGS PIRRPDVQQR TLIGLGLNKM HRRRTLEDTP   50
    SVRGMIRAVQ HLVRVVDEK 69
    Length:69
    Mass (Da):7,830
    Last modified:May 30, 2006 - v1
    Checksum:iFA364834CB635F4B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM236080 Genomic DNA. Translation: CAK07287.1.
    RefSeqiYP_767396.1. NC_008380.1.

    Genome annotation databases

    EnsemblBacteriaiCAK07287; CAK07287; RL1792.
    GeneIDi4401373.
    KEGGirle:RL1792.
    PATRICi23140171. VBIRhiLeg32091_3019.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM236080 Genomic DNA. Translation: CAK07287.1 .
    RefSeqi YP_767396.1. NC_008380.1.

    3D structure databases

    ProteinModelPortali Q1MIC3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 216596.RL1792.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAK07287 ; CAK07287 ; RL1792 .
    GeneIDi 4401373.
    KEGGi rle:RL1792.
    PATRICi 23140171. VBIRhiLeg32091_3019.

    Phylogenomic databases

    eggNOGi COG1841.
    HOGENOMi HOG000039916.
    KOi K02907.
    OMAi CVRGMIA.
    OrthoDBi EOG6BGP7P.

    Enzyme and pathway databases

    BioCyci RLEG216596:GKE5-1832-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1390.20. 1 hit.
    HAMAPi MF_01371_B. Ribosomal_L30_B.
    InterProi IPR005996. Ribosomal_L30_bac-type.
    IPR016082. Ribosomal_L30_ferredoxin-like.
    [Graphical view ]
    Pfami PF00327. Ribosomal_L30. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002211. Ribosomal_L30_bac-type. 1 hit.
    SUPFAMi SSF55129. SSF55129. 1 hit.
    TIGRFAMsi TIGR01308. rpmD_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 3841.

    Entry informationi

    Entry nameiRL30_RHIL3
    AccessioniPrimary (citable) accession number: Q1MIC3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 2, 2008
    Last sequence update: May 30, 2006
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3