Q1MIC3 (RL30_RHIL3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L30

Gene names

Name:	rpmD
Ordered Locus Names:	RL1792

Organism

Rhizobium leguminosarum bv. viciae (strain 3841) [Complete proteome] [HAMAP]

Taxonomic identifier

216596 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium › Rhizobium leguminosarum › Rhizobium leguminosarum bv. viciae

Protein attributes

Sequence length	69 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein L30P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 69	69	50S ribosomal protein L30 HAMAP-Rule MF_01371		PRO_0000347135

Sequences

	Sequence		Length	Mass (Da)
	Q1MIC3 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: FA364834CB635F4B	FASTA	69	7,830
	10 20 30 40 50 60 MAKATKKAEA KTVTIEQIGS PIRRPDVQQR TLIGLGLNKM HRRRTLEDTP SVRGMIRAVQ HLVRVVDEK

References

[1]

"The genome of Rhizobium leguminosarum has recognizable core and accessory components." Young J.P.W., Crossman L.C., Johnston A.W.B., Thomson N.R., Ghazoui Z.F., Hull K.H., Wexler M., Curson A.R.J., Todd J.D., Poole P.S., Mauchline T.H., East A.K., Quail M.A., Churcher C., Arrowsmith C., Cherevach I., Chillingworth T., Clarke K. , Cronin A., Davis P., Fraser A., Hance Z., Hauser H., Jagels K., Moule S., Mungall K., Norbertczak H., Rabbinowitsch E., Sanders M., Simmonds M., Whitehead S., Parkhill J. Genome Biol. 7:R34.1-R34.20(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 3841.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM236080 Genomic DNA. Translation: CAK07287.1.
RefSeq	YP_767396.1. NC_008380.1.
3D structure databases
ProteinModelPortal	Q1MIC3.
ModBase	Search...
Protein-protein interaction databases
STRING	216596.RL1792.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAK07287; CAK07287; RL1792.
GeneID	4401373.
KEGG	rle:RL1792.
PATRIC	23140171. VBIRhiLeg32091_3019.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1841.
HOGENOM	HOG000039916.
KO	K02907.
OMA	CVRGMIA.
ProtClustDB	PRK05611.
Family and domain databases
Gene3D	3.30.1390.20. 1 hit.
HAMAP	MF_01371_B. Ribosomal_L30_B.
InterPro	IPR005996. Ribosomal_L30_bac-type. IPR016082. Ribosomal_L30_ferredoxin-like. [Graphical view]
Pfam	PF00327. Ribosomal_L30. 1 hit. [Graphical view]
PIRSF	PIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAM	SSF55129. Ribosomal_L30. 1 hit.
TIGRFAMs	TIGR01308. rpmD_bact. 1 hit.
PROSITE	PS00634. RIBOSOMAL_L30. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL30_RHIL3

Accession

Primary (citable) accession number: Q1MIC3

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 2, 2008
Last sequence update:	May 30, 2006
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program