tdk

Functionⁱ

Catalytic activityⁱ

ATP + thymidine = ADP + thymidine 5'-phosphate.UniRule annotation

Sites

Feature key	Position(s)	Length	Description
Active siteⁱ	89 – 89	1	Proton acceptorUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124
Metal bindingⁱ	146 – 146	1	ZincUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124
Metal bindingⁱ	148 – 148	1	ZincUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124
Metal bindingⁱ	183 – 183	1	ZincUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124
Metal bindingⁱ	186 – 186	1	ZincUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124

Regions

Feature key	Position(s)	Length	Description	Graphical view	Feature identifier	Actions
Nucleotide bindingⁱ	9 – 16	8	ATPUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124
Nucleotide bindingⁱ	88 – 91	4	ATPUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124

GO - Molecular functionⁱ

ATP binding Source: UniProtKB-HAMAP
thymidine kinase activity Source: UniProtKB-HAMAP
zinc ion binding Source: UniProtKB-HAMAP

GO - Biological processⁱ

DNA biosynthetic process Source: UniProtKB-KW

Complete GO annotation...

Keywords - Molecular functionⁱ

KinaseUniRule annotationImported, Transferase

Keywords - Biological processⁱ

DNA synthesisUniRule annotation

Keywords - Ligandⁱ

ATP-bindingUniRule annotation, Metal-bindingUniRule annotation, Nucleotide-binding, ZincUniRule annotation

Enzyme and pathway databases

BioCycⁱ	RLEG216596:GKE5-3585-MONOMER.

BioCycⁱ

RLEG216596:GKE5-3585-MONOMER.

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: Thymidine kinaseUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124 RuleBase:RU000544 (EC:2.7.1.21UniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124 RuleBase:RU000544 )
Gene namesⁱ	Name:tdkUniRule annotation Automatic assertion according to rulesⁱ HAMAP-Rule:MF_00124 Imported Automatic assertion inferred from database entriesⁱ EMBL:CAK09020.1 Ordered Locus Names:RL3532Imported Automatic assertion inferred from database entriesⁱ EMBL:CAK09020.1
Organismⁱ	Rhizobium leguminosarum bv. viciae (strain 3841)Imported Automatic assertion inferred from database entriesⁱ EMBL:CAK09020.1 Proteomes:UP000006575
Taxonomic identifierⁱ	216596 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium › Rhizobium leguminosarum › Rhizobium leguminosarum bv. viciae
Proteomesⁱ	UP000006575 Componentⁱ: Chromosome

Subcellular locationⁱ

Cytoplasm
UniRule annotation
Automatic assertion according to rulesⁱ
- HAMAP-Rule:MF_00124

GO - Cellular componentⁱ

cytoplasm Source: UniProtKB-SubCell

Complete GO annotation...

Keywords - Cellular componentⁱ

CytoplasmUniRule annotation

Interactionⁱ

Subunit structureⁱ

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGⁱ	216596.RL3532.

STRINGⁱ

216596.RL3532.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	Q1MDF7.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Sequence similaritiesⁱ

Belongs to the thymidine kinase family.UniRule annotation

Phylogenomic databases

eggNOGⁱ	ENOG4107104. Bacteria. COG1435. LUCA.
HOGENOMⁱ	HOG000076391.
KOⁱ	K00857.
OMAⁱ	RATHNAR.
OrthoDBⁱ	POG091H0659.

Family and domain databases

HAMAPⁱ	MF_00124. Thymidine_kinase. 1 hit.
InterProⁱ	IPR027417. P-loop_NTPase. IPR001267. Thymidine_kinase. IPR020633. Thymidine_kinase_CS. [Graphical view]
PANTHERⁱ	PTHR11441. PTHR11441. 1 hit.
Pfamⁱ	PF00265. TK. 1 hit. [Graphical view]
PIRSFⁱ	PIRSF035805. TK_cell. 1 hit.
SUPFAMⁱ	SSF52540. SSF52540. 1 hit.
PROSITEⁱ	PS00603. TK_CELLULAR_TYPE. 1 hit. [Graphical view]

Sequenceⁱ

Sequence statusⁱ: Complete.

Q1MDF7-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MAKLYFNYST MNAGKSTMLL QASYNYQERG MRTVQLIAAF DERAGRGVIG 
        60         70         80         90        100
SRIGLEASAI PFEPHEDLFR LVATLSGEGA PISCIFVDEA HFMTPVHVWQ 
       110        120        130        140        150
LARVVDRLGI PVMVYGLRTD FQGKLFPASQ ELLAIADEMR EVRTICHCGR 
       160        170        180        190        200
KATMVVRLDA EGKVLHEGAQ IDVGGNEKYV SLCRRHWDDA MNGTWIAEPV

Length:200

Mass (Da):22,306

Last modified:May 30, 2006 - v1

Checksum:ⁱD0EDF7ADE7013DA1

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AM236080 Genomic DNA. Translation: CAK09020.1.
RefSeqⁱ	WP_011653005.1. NC_008380.1.

Genome annotation databases

EnsemblBacteriaⁱ	CAK09020; CAK09020; RL3532.
KEGGⁱ	rle:RL3532.
PATRICⁱ	23143817. VBIRhiLeg32091_4828.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AM236080 Genomic DNA. Translation: CAK09020.1.
RefSeqⁱ	WP_011653005.1. NC_008380.1.

3D structure databases

ProteinModelPortalⁱ	Q1MDF7.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	216596.RL3532.

STRINGⁱ

216596.RL3532.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	CAK09020; CAK09020; RL3532.
KEGGⁱ	rle:RL3532.
PATRICⁱ	23143817. VBIRhiLeg32091_4828.

Phylogenomic databases

eggNOGⁱ	ENOG4107104. Bacteria. COG1435. LUCA.
HOGENOMⁱ	HOG000076391.
KOⁱ	K00857.
OMAⁱ	RATHNAR.
OrthoDBⁱ	POG091H0659.

Enzyme and pathway databases

BioCycⁱ	RLEG216596:GKE5-3585-MONOMER.

BioCycⁱ

RLEG216596:GKE5-3585-MONOMER.

Family and domain databases

HAMAPⁱ	MF_00124. Thymidine_kinase. 1 hit.
InterProⁱ	IPR027417. P-loop_NTPase. IPR001267. Thymidine_kinase. IPR020633. Thymidine_kinase_CS. [Graphical view]
PANTHERⁱ	PTHR11441. PTHR11441. 1 hit.
Pfamⁱ	PF00265. TK. 1 hit. [Graphical view]
PIRSFⁱ	PIRSF035805. TK_cell. 1 hit.
SUPFAMⁱ	SSF52540. SSF52540. 1 hit.
PROSITEⁱ	PS00603. TK_CELLULAR_TYPE. 1 hit. [Graphical view]
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ

Q1MDF7_RHIL3

Accessionⁱ

Primary (citable) accession number: Q1MDF7

Entry historyⁱ

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	September 7, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]

Entry statusⁱ

Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteomeImported

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - Q1MDF7 (Q1MDF7_RHIL3)

UniProt

Q1MDF7 - Q1MDF7_RHIL3

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Thymidine kinase

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<p>Provides any useful information about the protein, mostly biological knowledge.</p><p><a href='../manual/function_section' target='_top'>More...</a></p>Functioni

Sites

Regions

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

<p>Provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.</p><p><a href='../manual/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>Provides information on the location and the topology of the mature protein in the cell.</p><p><a href='../manual/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>Provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.</p><p><a href='../manual/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>Provides information on the tertiary and secondary structure of a protein.</p><p><a href='../manual/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>Provides information on sequence similarities with other proteins and the domain(s) present in a protein.</p><p><a href='../manual/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>Provides information about the sequence similarity with other proteins.</p><p><a href='../manual/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

Family and domain databases

<p>Displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.</p><p><a href='../manual/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>Is used to point to information related to entries and found in data collections other than UniProtKB.</p><p><a href='../manual/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>Provides general information on the entry.</p><p><a href='../manual/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>Contains any relevant information that doesn’t fit in any other defined sections</p><p><a href='../manual/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ