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Protein
Submitted name:

Putative sensory box HD domain protein

Gene

RL3539

Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-3592-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative sensory box HD domain proteinImported
Gene namesi
Ordered Locus Names:RL3539Imported
OrganismiRhizobium leguminosarum bv. viciae (strain 3841)Imported
Taxonomic identifieri216596 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000006575 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi216596.RL3539.

Structurei

3D structure databases

ProteinModelPortaliQ1MDF0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2206.
HOGENOMiHOG000280223.
OMAiCLNHHER.
OrthoDBiEOG6PP9MV.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR021812. DUF3391.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. HDIG_dom.
[Graphical view]
PfamiPF11871. DUF3391. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00277. HDIG. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1MDF0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKRIEARQV RNGMFVEAIE GAWQDPLLSK RRFLLRREVD ALKLRKSGIE
60 70 80 90 100
GVVINTSRGL DIDGLPGGNV EIDTKAARET IQKSVQVLES VFGRLQHGDG
110 120 130 140 150
IGFDQVAPVI SSVSKSMDDN PTVFLSVTRL KSKDEVTFLH SLSVSALMIL
160 170 180 190 200
FARHLGLDET TVQMLGTAGL LHDVGKLEIP LEILNKEGRL DEDEIKMIRD
210 220 230 240 250
HPEKGHAILS RQEGMPEIVL DVCLNHHERI DGKGYPRRLS EAQVSFHARL
260 270 280 290 300
AAICDVYDAM TSVRPYKAPW SASQALKWML GNEGQFDRRL LKKFALCLSV

AAVT
Length:304
Mass (Da):33,873
Last modified:May 30, 2006 - v1
Checksum:iAACF86F131B9EC32
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM236080 Genomic DNA. Translation: CAK09027.1.
RefSeqiWP_011653011.1. NC_008380.1.
YP_769119.1. NC_008380.1.

Genome annotation databases

EnsemblBacteriaiCAK09027; CAK09027; RL3539.
KEGGirle:RL3539.
PATRICi23143831. VBIRhiLeg32091_4835.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM236080 Genomic DNA. Translation: CAK09027.1.
RefSeqiWP_011653011.1. NC_008380.1.
YP_769119.1. NC_008380.1.

3D structure databases

ProteinModelPortaliQ1MDF0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216596.RL3539.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK09027; CAK09027; RL3539.
KEGGirle:RL3539.
PATRICi23143831. VBIRhiLeg32091_4835.

Phylogenomic databases

eggNOGiCOG2206.
HOGENOMiHOG000280223.
OMAiCLNHHER.
OrthoDBiEOG6PP9MV.

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-3592-MONOMER.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR021812. DUF3391.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. HDIG_dom.
[Graphical view]
PfamiPF11871. DUF3391. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00277. HDIG. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3841Imported.

Entry informationi

Entry nameiQ1MDF0_RHIL3
AccessioniPrimary (citable) accession number: Q1MDF0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: May 27, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.