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Q1MBS9

- GLGB1_RHIL3

UniProt

Q1MBS9 - GLGB1_RHIL3

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Protein

1,4-alpha-glucan branching enzyme GlgB 1

Gene
glgB1, RL4115
Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei418 – 4181Nucleophile By similarity
Active sitei471 – 4711Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-3666-MONOMER.
RLEG216596:GKE5-4182-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB 1 (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1
Alpha-(1->4)-glucan branching enzyme 1
Glycogen branching enzyme 1
Short name:
BE 1
Gene namesi
Name:glgB1
Ordered Locus Names:RL4115
OrganismiRhizobium leguminosarum bv. viciae (strain 3841)
Taxonomic identifieri216596 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000006575: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7357351,4-alpha-glucan branching enzyme GlgB 1UniRule annotationPRO_0000260684Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi216596.RL4115.

Structurei

3D structure databases

ProteinModelPortaliQ1MBS9.
SMRiQ1MBS9. Positions 126-735.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiPIGVAYK.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1MBS9-1 [UniParc]FASTAAdd to Basket

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MKTPKTVPEV KLSWEISADE ITAILAGSHS NPFAVLGVHQ AGDAFVARCF    50
IPGAEEVTAM TLDGGVIGEL KQLHADGVFA GPVSLTKLQP VRYRARRGDA 100
EWAVTDPYSF GPVLGPMDDY FAREGSHLRL FDKMGAHLIK HDGAQGIHFA 150
VWAPNAQRVS VVGDFNNWDG RRHVMRFRSD SGIWEIFAPD VPIGVAYKFE 200
IRGQDGVLLP LKADPFARRS ELRPKTASVT AAELEQEWED EAHLKHWRET 250
DKRRQPISIY EVHAASWQRR QDGTMLSWDE LASSLIPYCA DMGFTHIEFL 300
PITEYPYDPS WGYQTTGLYA PTARFGEPEG FARFVNGCHK VGIGVILDWV 350
PAHFPTDEHG LGWFDGTALY EHEDPRKGFH PDWSTAIYNF GRTEVVSYLV 400
NNALYWAEKF HLDGLRVDAV ASMLYLDYSR KHGEWIPNEY GGNENLEAVR 450
FLQDLNIRIY GKNSNVMTIA EESTSWPKVS QPVHEGGLGF GFKWNMGFMH 500
DTLSYMSRDP IYRGHHHNEL TFGLLYAYSE NFVLPLSHDE VVHGKGSLIA 550
KMPGDDWQKF ANLRAYYAYM WGYPGKKLLF MGQEFAQWSE WSEEKALDWN 600
LLQYRMHEGM RRLVRDLNFT YRSKPALHAR DCEGEGFEWL VADDHQNSVF 650
AWLRKAPGQK PVAVITNFTP IYRENYSIRL PSAGRWREIL NTDADIYGGS 700
GKGNGGRVQA VDAGGNITCS ITLPPLATIM LEPEN 735
Length:735
Mass (Da):83,250
Last modified:May 30, 2006 - v1
Checksum:iC5146A79B7FCD295
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM236080 Genomic DNA. Translation: CAK09604.1.
RefSeqiYP_769690.1. NC_008380.1.

Genome annotation databases

EnsemblBacteriaiCAK09604; CAK09604; RL4115.
GeneIDi4400345.
KEGGirle:RL4115.
PATRICi23145051. VBIRhiLeg32091_5436.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM236080 Genomic DNA. Translation: CAK09604.1 .
RefSeqi YP_769690.1. NC_008380.1.

3D structure databases

ProteinModelPortali Q1MBS9.
SMRi Q1MBS9. Positions 126-735.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 216596.RL4115.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAK09604 ; CAK09604 ; RL4115 .
GeneIDi 4400345.
KEGGi rle:RL4115.
PATRICi 23145051. VBIRhiLeg32091_5436.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi PIGVAYK.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci RETL1328306-WGS:GSTH-3666-MONOMER.
RLEG216596:GKE5-4182-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3841.

Entry informationi

Entry nameiGLGB1_RHIL3
AccessioniPrimary (citable) accession number: Q1MBS9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: May 30, 2006
Last modified: July 9, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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