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Q1MBS9

- GLGB1_RHIL3

UniProt

Q1MBS9 - GLGB1_RHIL3

Protein

1,4-alpha-glucan branching enzyme GlgB 1

Gene

glgB1

Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 1 (30 May 2006)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei418 – 4181NucleophileUniRule annotation
    Active sitei471 – 4711Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-3666-MONOMER.
    RLEG216596:GKE5-4182-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiCBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgB 1UniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1UniRule annotation
    Alpha-(1->4)-glucan branching enzyme 1UniRule annotation
    Glycogen branching enzyme 1UniRule annotation
    Short name:
    BE 1UniRule annotation
    Gene namesi
    Name:glgB1UniRule annotation
    Ordered Locus Names:RL4115
    OrganismiRhizobium leguminosarum bv. viciae (strain 3841)
    Taxonomic identifieri216596 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
    ProteomesiUP000006575: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7357351,4-alpha-glucan branching enzyme GlgB 1PRO_0000260684Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi216596.RL4115.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1MBS9.
    SMRiQ1MBS9. Positions 126-735.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiPIGVAYK.
    OrthoDBiEOG6JX7GT.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1MBS9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKTPKTVPEV KLSWEISADE ITAILAGSHS NPFAVLGVHQ AGDAFVARCF    50
    IPGAEEVTAM TLDGGVIGEL KQLHADGVFA GPVSLTKLQP VRYRARRGDA 100
    EWAVTDPYSF GPVLGPMDDY FAREGSHLRL FDKMGAHLIK HDGAQGIHFA 150
    VWAPNAQRVS VVGDFNNWDG RRHVMRFRSD SGIWEIFAPD VPIGVAYKFE 200
    IRGQDGVLLP LKADPFARRS ELRPKTASVT AAELEQEWED EAHLKHWRET 250
    DKRRQPISIY EVHAASWQRR QDGTMLSWDE LASSLIPYCA DMGFTHIEFL 300
    PITEYPYDPS WGYQTTGLYA PTARFGEPEG FARFVNGCHK VGIGVILDWV 350
    PAHFPTDEHG LGWFDGTALY EHEDPRKGFH PDWSTAIYNF GRTEVVSYLV 400
    NNALYWAEKF HLDGLRVDAV ASMLYLDYSR KHGEWIPNEY GGNENLEAVR 450
    FLQDLNIRIY GKNSNVMTIA EESTSWPKVS QPVHEGGLGF GFKWNMGFMH 500
    DTLSYMSRDP IYRGHHHNEL TFGLLYAYSE NFVLPLSHDE VVHGKGSLIA 550
    KMPGDDWQKF ANLRAYYAYM WGYPGKKLLF MGQEFAQWSE WSEEKALDWN 600
    LLQYRMHEGM RRLVRDLNFT YRSKPALHAR DCEGEGFEWL VADDHQNSVF 650
    AWLRKAPGQK PVAVITNFTP IYRENYSIRL PSAGRWREIL NTDADIYGGS 700
    GKGNGGRVQA VDAGGNITCS ITLPPLATIM LEPEN 735
    Length:735
    Mass (Da):83,250
    Last modified:May 30, 2006 - v1
    Checksum:iC5146A79B7FCD295
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM236080 Genomic DNA. Translation: CAK09604.1.
    RefSeqiYP_769690.1. NC_008380.1.

    Genome annotation databases

    EnsemblBacteriaiCAK09604; CAK09604; RL4115.
    GeneIDi4400345.
    KEGGirle:RL4115.
    PATRICi23145051. VBIRhiLeg32091_5436.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM236080 Genomic DNA. Translation: CAK09604.1 .
    RefSeqi YP_769690.1. NC_008380.1.

    3D structure databases

    ProteinModelPortali Q1MBS9.
    SMRi Q1MBS9. Positions 126-735.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 216596.RL4115.

    Protein family/group databases

    CAZyi CBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAK09604 ; CAK09604 ; RL4115 .
    GeneIDi 4400345.
    KEGGi rle:RL4115.
    PATRICi 23145051. VBIRhiLeg32091_5436.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi PIGVAYK.
    OrthoDBi EOG6JX7GT.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci RETL1328306-WGS:GSTH-3666-MONOMER.
    RLEG216596:GKE5-4182-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 3841.

    Entry informationi

    Entry nameiGLGB1_RHIL3
    AccessioniPrimary (citable) accession number: Q1MBS9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 28, 2006
    Last sequence update: May 30, 2006
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3