Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative HD domain transcriptional regulatory protein

Gene

pRL120258

Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-5075-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative HD domain transcriptional regulatory proteinImported
Gene namesi
Ordered Locus Names:pRL120258Imported
Encoded oniPlasmid pRL12Imported
OrganismiRhizobium leguminosarum bv. viciae (strain 3841)Imported
Taxonomic identifieri216596 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000006575 Componenti: Plasmid pRL12

Structurei

3D structure databases

ProteinModelPortaliQ1M4K1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2206.
HOGENOMiHOG000280223.
OMAiRECVEDT.
OrthoDBiEOG6PP9MV.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR021812. DUF3391.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. HDIG_dom.
[Graphical view]
PfamiPF11871. DUF3391. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00277. HDIG. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1M4K1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKRIHVSQL RVGMYVEDVE IEGEDRTRRF KPFLISAAGQ VESLMASRLM
60 70 80 90 100
TVVIDVGKGA DVDPGGAQDI DRAAFDAQLR AVFSAKDIKQ ARECVEDTRP
110 120 130 140 150
QIRQMLAHAR IKASFASDAA SAAVERIMSA AFDNAGALIA VAKLKEKDEL
160 170 180 190 200
TFLHSLAVSA LMITLGRSLG HGEEDVRVLG LGGLVHDLGK MALPDEILTK
210 220 230 240 250
PGKLTAEEMD LVRGHPQRGY ELVSHVAHVP KPVLDICRYH HEKFDGSGYP
260 270 280 290 300
GRLAGKKIPY VARLAAICDV YEALTTIRPY KRAFSQAEAI NMMMNSPGHF
310
DSQLLSAFVS KMVISGTLH
Length:319
Mass (Da):34,901
Last modified:May 30, 2006 - v1
Checksum:i18608955F01A5A20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM236086 Genomic DNA. Translation: CAK11970.1.

Genome annotation databases

EnsemblBacteriaiCAK11970; CAK11970; pRL120258.
KEGGirle:pRL120258.
PATRICi23134601. VBIRhiLeg32091_0262.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM236086 Genomic DNA. Translation: CAK11970.1.

3D structure databases

ProteinModelPortaliQ1M4K1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK11970; CAK11970; pRL120258.
KEGGirle:pRL120258.
PATRICi23134601. VBIRhiLeg32091_0262.

Phylogenomic databases

eggNOGiCOG2206.
HOGENOMiHOG000280223.
OMAiRECVEDT.
OrthoDBiEOG6PP9MV.

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-5075-MONOMER.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR021812. DUF3391.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. HDIG_dom.
[Graphical view]
PfamiPF11871. DUF3391. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00277. HDIG. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3841Imported.

Entry informationi

Entry nameiQ1M4K1_RHIL3
AccessioniPrimary (citable) accession number: Q1M4K1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: July 22, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.