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Protein
Submitted name:

Probable MCP type chemoreceptor

Gene

mcpB

Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-5498-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable MCP type chemoreceptorImported
Gene namesi
Name:mcpBImported
Ordered Locus Names:pRL120683Imported
Encoded oniPlasmid pRL12Imported
OrganismiRhizobium leguminosarum bv. viciae (strain 3841)Imported
Taxonomic identifieri216596 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000006575 Componenti: Plasmid pRL12

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei300 – 31819HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ1M3D3.
SMRiQ1M3D3. Positions 477-701.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini319 – 37254HAMPInterPro annotationAdd
BLAST
Domaini400 – 45152HAMPInterPro annotationAdd
BLAST
Domaini456 – 685230Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili368 – 40235Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000148074.
KOiK03406.
OMAiRHELGAM.
OrthoDBiPOG091H0QRR.

Family and domain databases

InterProiIPR003660. HAMP_dom.
IPR032255. HBM.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM01358. HBM. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1M3D3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMLHFWNKFG IRAQITSGFV PLILLMSLLT VSAISGMNGL ASIFSSYRAT
60 70 80 90 100
AGQSLAISDY SDQLNEIQMS AEAFRSTPTQ AVVDRFRAGV KAFDADDPRF
110 120 130 140 150
AGNKDLQSGL AAIRQDIATY GKAFEEIVAL QARRDALISK VTEFGPWTSI
160 170 180 190 200
ALNDVVRSAW RQNDVPLLQM TAATLEALNR SLYFSERFVH SDDFAAYDTA
210 220 230 240 250
QAALAEAVTL NEAAAKAAKN ELQKKRLMGA GQLMQNYTAR LGDMKDVLQA
260 270 280 290 300
SGNIRQTQLS VLAPKISGGF KDLQATVTGA QKTLDGSVDA TVASATSTTL
310 320 330 340 350
IISGLLIVIG LVLSYFVGRL ISSAVRNMAQ SMEQLARGEE RIVITGVEHR
360 370 380 390 400
HELGAMARSL KVFQETGRAK LIAEANAERA RLAAEEERLR QEAERLSDAQ
410 420 430 440 450
VMEHAFRQIS VGLDALSKGD LTVRVGEVDH RYVRIRDHFN NSVASLEEAV
460 470 480 490 500
DAVIRAVGTI RSGLAEISTA SNDLARRTEQ QAASLEETVA ALGEVTRGVN
510 520 530 540 550
GTAEGASRAQ GVVATARTNA EKGGEIVARA IDAMTEIQNS SSKIGNIISV
560 570 580 590 600
IDEIAFQTNL LALNAGVEAA RAGEAGKGFA VVAQEVRELA QRSANAAREI
610 620 630 640 650
KQLISTSSAQ VKTGVQLVGE SGLSLEQIVE QVTAMNATVA EIAVAAREQA
660 670 680 690 700
TSLREVSAAG DQMDKVTQQN AAMVEETTAA AQSLTHETES LAELLRRFRT
710
GSGRVSEHRH YAMAS
Length:715
Mass (Da):76,630
Last modified:May 30, 2006 - v1
Checksum:i9A38E9BB36E5D387
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM236086 Genomic DNA. Translation: CAK12392.1.

Genome annotation databases

EnsemblBacteriaiCAK12392; CAK12392; pRL120683.
KEGGirle:pRL120683.
PATRICi23135451. VBIRhiLeg32091_0687.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM236086 Genomic DNA. Translation: CAK12392.1.

3D structure databases

ProteinModelPortaliQ1M3D3.
SMRiQ1M3D3. Positions 477-701.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK12392; CAK12392; pRL120683.
KEGGirle:pRL120683.
PATRICi23135451. VBIRhiLeg32091_0687.

Phylogenomic databases

HOGENOMiHOG000148074.
KOiK03406.
OMAiRHELGAM.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-5498-MONOMER.

Family and domain databases

InterProiIPR003660. HAMP_dom.
IPR032255. HBM.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM01358. HBM. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ1M3D3_RHIL3
AccessioniPrimary (citable) accession number: Q1M3D3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: September 7, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.