Q1LX47 (Q1LX47_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Protein Wnt RuleBase RU003503

Gene names

Name:	wnt2 ZFIN ZDB-GENE-980526-416
ORF Names:	CH211-238N5.8-001 EMBL CAK04667.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAK04667.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	350 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	Ligand for members of the frizzled family of seven transmembrane receptors By similarity. RuleBase RU003500
Subcellular location	Secreted › extracellular space › extracellular matrix By similarity RuleBase RU003500.
Sequence similarities	Belongs to the Wnt family. RuleBase RU003500

Ontologies

Keywords
Biological process	Wnt signaling pathway SAAS SAAS005817 RuleBase RU003500
Cellular component	Extracellular matrix SAAS SAAS005817 Secreted
Molecular function	Developmental protein SAAS SAAS005817 RuleBase RU003500
Gene Ontology (GO)
Biological process	Wnt receptor signaling pathway Inferred from electronic annotation. Source: UniProtKB-KW multicellular organismal development Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	proteinaceous extracellular matrix Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	receptor binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1LX47 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: F6268DADE9361C6C	FASTA	350	39,789
	10 20 30 40 50 60 MNFLPNGICF YLSVAICWFS SRVDASWWYM GTLGSQVMCD NIPGLINKQR QLCRQHPKVM 70 80 90 100 110 120 QAIGAGIKNW IGECQHQFRT HRWNCNTMAR EHNLFGRLLH RSSREAAFVY AISSAGMVYT 130 140 150 160 170 180 LTRACSQGEL ENCSCDPGKK GSSRDAKGAF DWGGCSDHVD HAIKFTQVFI DAKERKERDA 190 200 210 220 230 240 RALMNLHNNR AGRKAVKRFM NLECKCHGVS GSCNVRTCWL AMADFRQTGD YLRKKYNNAI 250 260 270 280 290 300 QVVMNQYGTG FTSAYRMLKR PNKNDLVYFE DSPDYCIWDH ESGSVGTGGR VCNRTSRGTD 310 320 330 340 350 SCEVMCCGRG YDTSRVSRTT KCECKFQWCC AVHCRDCQEE VDVHTCKTQS

References

[1]	Phillimore B. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Humphries M. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX470166, BX470130 Genomic DNA. Translation: CAK04667.1. BX470130, BX470166 Genomic DNA. Translation: CAK10922.1.
IPI	IPI00503194.
RefSeq	NP_571025.1. NM_130950.1.
UniGene	Dr.378.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q1LX47.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	30127.
KEGG	dre:30127.
Organism-specific databases
CTD	7472.
ZFIN	ZDB-GENE-980526-416. wnt2.
Phylogenomic databases
HOVERGEN	HBG001595.
InParanoid	Q1LX47.
OMA	DASWWYM.
PhylomeDB	Q1LX47.
Gene expression databases
ArrayExpress	Q1LX47.
Bgee	Q1LX47.
Family and domain databases
InterPro	IPR005817. Wnt. IPR009140. Wnt2. IPR018161. Wnt_grthfactor_CS. [Graphical view]
PANTHER	PTHR12027. Wnt. 1 hit.
Pfam	PF00110. wnt. 1 hit. [Graphical view]
PRINTS	PR01842. WNT2PROTEIN. PR01349. WNTPROTEIN.
SMART	SM00097. WNT1. 1 hit. [Graphical view]
PROSITE	PS00246. WNT1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1LX47_DANRE

Accession

Primary (citable) accession number: Q1LX47

Entry history

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	January 25, 2012
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)