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Unreviewed, UniProtKB/TrEMBL Q1LVP2 (Q1LVP2_DANRE)

Last modified November 24, 2009. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Novel protein similar to vertebrate UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12) (GALNT12) EMBL CAK05028.1
Gene names
Name: si:ch211-9n13.2 ZFIN ZDB-GENE-060503-704
ORF Names: CH211-9N13.2-001 EMBL CAK05028.1
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL CAK05028.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

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Protein attributes

Sequence length521 AA.
Sequence statusFragment.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CAK05028.1

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Sequences

Sequence LengthMass (Da)Tools
Q1LVP2-1 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 85065BAA47FCFC6A

FASTA52160,083
        10         20         30         40         50         60 
PVYEKPALDV NALGEMGRAV KLDLSGEEKR EEEESIKKHQ INTYVSDRIS LHRRLAERWN 

        70         80         90        100        110        120 
PLCRNLKYDY LSLPTTSVVI AFYNEAWSTL LRTVHSVLET SPDLLLNEVI LVDDYSDREH 

       130        140        150        160        170        180 
LKEPLENYIA DLKKVRLIRA RKREGLVRAR LLGASIATGE VLTFLDCHCE CHEGWLEPLL 

       190        200        210        220        230        240 
QRIKEEPSAV VCPVIDVIDW NTFQYLGNPG EPQIGGFDWR LVFTWHSIPE HEQKRRSAAT 

       250        260        270        280        290        300 
DVVRSPTMAG GLFAVNKKYF LYLGTYDTGM EVWGGENLEF SFRIWQCGGS LEIHPCSHVG 

       310        320        330        340        350        360 
HVFPKKAPYS RNKALANSVR AAEVWMDDFK EVYYHRSPHA RLEAYGDVTD RRKLRMRLRC 

       370        380        390        400        410        420 
KDFRWFLDNI YPDIQVPEDK PGMFGMLKNK GMTNYCFDYN PPDEHKIAGH RVILYPCHGM 

       430        440        450        460        470        480 
GQNQFFEYST LQEIRYNTRD PAGCVVADPV STFLTMNLCS KPREAVPEDQ KFLFREDGSL 

       490        500        510        520 
YHVQTQKCVE AVDRTDAGSP GPALRPCSDS DAQKWFFEER T

« Hide

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References

[1]Barker G.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

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Cross-references

Sequence databases

BX649545 Genomic DNA. Translation: CAK05028.1.
IPIIPI00491601.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyCBM13. Carbohydrate-Binding Module Family 13.
GT27. Glycosyltransferase Family 27.

Genome annotation databases

EnsemblENSDART00000077850; ENSDARP00000072316; ENSDARG00000055490; Danio rerio. [Genome view]

Organism-specific databases

ZFINZDB-GENE-060503-704. si:ch211-9n13.2.

Phylogenomic databases

HOVERGENQ1LVP2.
OMAERWNPLC
OrthoDBEOG9STVQ9
PhylomeDBQ1LVP2.

Family and domain databases

InterProIPR001173. Glyco_trans_2.
IPR008997. Ricin_B-rel_lectin.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamPF00535. Glycos_transf_2. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTSM00458. RICIN. 1 hit.
[Graphical view]
PROSITEPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ1LVP2_DANRE
AccessionPrimary (citable) accession number: Q1LVP2
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: November 24, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information