Q1LVP2 (Q1LVP2_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Novel protein similar to vertebrate UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12) (GALNT12) EMBL CAK05028.1

Submitted name:
Si:ch211-9n13.2 Ensembl ENSDARP00000120903

Gene names

Name:	si:ch211-9n13.2 Ensembl ENSDARP00000120903 ZFIN ZDB-GENE-060503-704
ORF Names:	CH211-9N13.2-001 EMBL CAK05028.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAK05028.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	521 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Calcium By similarity. SAAS SAAS001173 Manganese By similarity. SAAS SAAS001173
Pathway	Protein modification; protein glycosylation. SAAS SAAS001173
Sequence similarities	Contains 1 ricin B-type lectin domain. SAAS SAAS001173

Ontologies

Keywords
Cellular component	Golgi apparatus SAAS SAAS001173 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS001173
Ligand	Calcium SAAS SAAS001173 Lectin SAAS SAAS001173 Manganese SAAS SAAS001173
Molecular function	Glycosyltransferase SAAS SAAS000772 RuleBase RU003687 Transferase
PTM	Disulfide bond SAAS SAAS001173
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL CAK05028.1 Ensembl ENSDARP00000120903

Sequences

	Sequence		Length	Mass (Da)
	Q1LVP2 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: 85065BAA47FCFC6A	FASTA	521	60,083
	10 20 30 40 50 60 PVYEKPALDV NALGEMGRAV KLDLSGEEKR EEEESIKKHQ INTYVSDRIS LHRRLAERWN 70 80 90 100 110 120 PLCRNLKYDY LSLPTTSVVI AFYNEAWSTL LRTVHSVLET SPDLLLNEVI LVDDYSDREH 130 140 150 160 170 180 LKEPLENYIA DLKKVRLIRA RKREGLVRAR LLGASIATGE VLTFLDCHCE CHEGWLEPLL 190 200 210 220 230 240 QRIKEEPSAV VCPVIDVIDW NTFQYLGNPG EPQIGGFDWR LVFTWHSIPE HEQKRRSAAT 250 260 270 280 290 300 DVVRSPTMAG GLFAVNKKYF LYLGTYDTGM EVWGGENLEF SFRIWQCGGS LEIHPCSHVG 310 320 330 340 350 360 HVFPKKAPYS RNKALANSVR AAEVWMDDFK EVYYHRSPHA RLEAYGDVTD RRKLRMRLRC 370 380 390 400 410 420 KDFRWFLDNI YPDIQVPEDK PGMFGMLKNK GMTNYCFDYN PPDEHKIAGH RVILYPCHGM 430 440 450 460 470 480 GQNQFFEYST LQEIRYNTRD PAGCVVADPV STFLTMNLCS KPREAVPEDQ KFLFREDGSL 490 500 510 520 YHVQTQKCVE AVDRTDAGSP GPALRPCSDS DAQKWFFEER T

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Barker G. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000120903.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000120903.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX649545 Genomic DNA. Translation: CAK05028.1.
IPI	IPI00491601.
3D structure databases
ProteinModelPortal	Q1LVP2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1LVP2.
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000141950; ENSDARP00000120903; ENSDARG00000055490.
Organism-specific databases
ZFIN	ZDB-GENE-060503-704. si:ch211-9n13.2.
Phylogenomic databases
eggNOG	fiNOG08922.
GeneTree	ENSGT00560000076578.
HOGENOM	HBG715048.
HOVERGEN	HBG051699.
InParanoid	Q1LVP2.
OMA	ERWNPLC.
OrthoDB	EOG43JC4G.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
SUPFAM	SSF50370. RicinB_like. 1 hit.
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1LVP2_DANRE

Accession

Primary (citable) accession number: Q1LVP2

Entry history

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)