Q1LVP1 (Q1LVP1_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Novel protein similar to vertebrate UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) (GALNT4) EMBL CAK05029.1

Submitted name:
POC1 centriolar protein homolog B (Chlamydomonas), like Ensembl ENSDARP00000017934 Ensembl ENSDARP00000121607

Gene names

Name:	poc1bl ZFIN ZDB-GENE-050306-41 Ensembl ENSDARP00000017934 Ensembl ENSDARP00000121607
Synonyms:	wdr51bl ZFIN ZDB-GENE-050306-41
ORF Names:	CH211-9N13.1-001 EMBL CAK05029.1, zgc:113219 ZFIN ZDB-GENE-050306-41

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAK05029.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	582 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Calcium By similarity. SAAS SAAS001173 Manganese By similarity. SAAS SAAS001173
Pathway	Protein modification; protein glycosylation. SAAS SAAS001173
Sequence similarities	Contains 1 ricin B-type lectin domain. SAAS SAAS001173

Ontologies

Keywords
Cellular component	Golgi apparatus SAAS SAAS001173 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS001173
Ligand	Calcium SAAS SAAS001173 Lectin SAAS SAAS001173 Manganese SAAS SAAS001173
Molecular function	Glycosyltransferase SAAS SAAS000772 RuleBase RU003687 Transferase
PTM	Disulfide bond SAAS SAAS001173
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1LVP1 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: 0D1549F40EF9F5AF	FASTA	582	67,166
	10 20 30 40 50 60 MKIRWSRKVA VLAKVCFLFS LLWLFYLLIV RSSPPSLADN DGRRDILARD LPPIEEEEED 70 80 90 100 110 120 SENLLRPVYE KLPPDSNAPG EYGRATRLTL TSEEKKEEEA SVERYAINIF ISDKISLHRH 130 140 150 160 170 180 IQDNRMHECK AKKYNIRRLP TTSVVIAFYN EAWSTLLRTI HSVLETTPAV LLKDIILVDD 190 200 210 220 230 240 FSDRGYLKSQ LAQYISNLER VRLIRTKKRE GLVRARLIGA TYATGSVLTF LDCHCECVPG 250 260 270 280 290 300 WIEPLLERIA ENETTIICPV IDTIDWNTFE FYMQTEEPMV GGFDWRLTFQ WHAVPEIDRK 310 320 330 340 350 360 IRKSRIDPIR SPTMAGGLFA VSKAYFEYLG TYDMGMEVWG GENLELSFRV WQCGGSLEIH 370 380 390 400 410 420 PCSHVGHVFP KKAPYARSNF LQNTVRAAEV WMDTYKQHFY NRNPPARKES YGDISERIVL 430 440 450 460 470 480 RNRLQCKSFE WYLQNVYPGL HVPEDRPGWH GAVRSAGIHS ECLDYNAPDH NPTGAHLSLF 490 500 510 520 530 540 GCHGQGGNQY FEYTSQREIR FNSVTELCAE VQDGMTHIGM KHCPQDGVPK PPSIIWQFRE 550 560 570 580 DGSIFHPHSN MCITSYRTEE GRADIQMRSC STGDKHQRWS FE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Barker G. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000017934 Ensembl ENSDARP00000121607.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000017934 Ensembl ENSDARP00000121607.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX927241 Genomic DNA. No translation available. BX649545 Genomic DNA. Translation: CAK05029.1.
IPI	IPI00616361.
UniGene	Dr.74822.
3D structure databases
ProteinModelPortal	Q1LVP1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1LVP1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000023046; ENSDARP00000017934; ENSDARG00000012745. ENSDART00000135592; ENSDARP00000121607; ENSDARG00000012745.
NMPDR	fig|7955.3.peg.10513.
Organism-specific databases
ZFIN	ZDB-GENE-050306-41. poc1bl.
Phylogenomic databases
eggNOG	fiNOG09817.
HOGENOM	HBG715048.
HOVERGEN	HBG051699.
InParanoid	Q1LVP1.
OMA	DWNTFEF.
OrthoDB	EOG466VKS.
PhylomeDB	Q1LVP1.
Gene expression databases
Bgee	Q1LVP1.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
SUPFAM	SSF50370. RicinB_like. 1 hit.
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1LVP1_DANRE

Accession

Primary (citable) accession number: Q1LVP1

Entry history

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)