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Q1LTZ4 (SUCC_BAUCH) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Succinyl-CoA ligase [ADP-forming] subunit beta
EC=6.2.1.5
Alternative name(s):
Succinyl-CoA synthetase subunit beta
Short name=SCS-beta
Gene names
Name:sucC
Ordered Locus Names:BCI_0097
OrganismBaumannia cicadellinicola subsp. Homalodisca coagulata [Complete proteome] [HAMAP]
Taxonomic identifier374463 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Candidatus Baumannia

Protein attributes

Sequence length393 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + succinate + CoA = ADP + phosphate + succinyl-CoA. HAMAP MF_00558

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity.

Pathway

Carbohydrate metabolism; tricarboxylic acid cycle; succinate from succinyl-CoA (ligase route): step 1/1. HAMAP MF_00558

Subunit structure

Heterotetramer of two alpha and two beta subunits By similarity.

Sequence similarities

Belongs to the succinate/malate CoA ligase beta subunit family.

Contains 1 ATP-grasp domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 393393Succinyl-CoA ligase [ADP-forming] subunit beta HAMAP MF_00558
PRO_1000082022

Regions

Domain9 – 245237ATP-grasp
Nucleotide binding35 – 10874ATP By similarity

Sites

Metal binding1981Magnesium or manganese By similarity
Metal binding2001Magnesium or manganese By similarity

Sequences

Sequence LengthMass (Da)Tools
Q1LTZ4 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: DC2255021012D409

FASTA39343,179
        10         20         30         40         50         60 
MKLHEYQAKM LFAQYGIPIP KGLVCTTPNE AKESIAVIGY GPWIVKCQVH AGGRGKSGGV 

        70         80         90        100        110        120 
RIVRSKEEIQ EFAKQWFGKH LITEQTNHIG QPVSKILVEA AIDIAQELYL GCLVDRSNQC 

       130        140        150        160        170        180 
IKFIASIQGG IDIENIAKEK PHLLHQIILD PLIGPQLYQS RDLAFKIGLS SKKQINQFNK 

       190        200        210        220        230        240 
IFMGLATLFL EKDLVMAEIN PLVITRLGDL ICLDGKLHVD SNALFRQPEL CKMLDPSQED 

       250        260        270        280        290        300 
KCETYAKQHN LNYIALNGNI GCLVNGAGLA MSTIDMVKFY GGEPANFLDV GGRVTQEKVT 

       310        320        330        340        350        360 
KAFQIILSDK KVKVILVNIF GGIVCCDVIA KGIINARLES GINIPVIVRL EGNNAKQGIQ 

       370        380        390 
HLVNSILNIR IATNLTTAAK QAVALVEGKQ CLF

« Hide

References

[1]"Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters."
Wu D., Daugherty S.C., Van Aken S.E., Pai G.H., Watkins K.L., Khouri H., Tallon L.J., Zaborsky J.M., Dunbar H.E., Tran P.L., Moran N.A., Eisen J.A.
PLoS Biol. 4:1079-1092(2006) [PubMed: 16729848] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000238 Genomic DNA. Translation: ABF14132.1.
RefSeqYP_588570.1. NC_007984.1.

3D structure databases

ProteinModelPortalQ1LTZ4.
SMRQ1LTZ4. Positions 1-389.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1LTZ4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4056318.
GenomeReviewsGene locus BCI_0097 in contig CP000238_GR.
KEGGbci:BCI_0097.
PATRIC21073681. VBIBauCic75062_0092.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0045.
HOGENOMHBG315432.
OMAIGGDMWV.
PhylomeDBQ1LTZ4.

Enzyme and pathway databases

BioCycBCIC186490:BCI_0097-MONOMER.

Family and domain databases

HAMAPMF_00558. Succ_CoA_beta.
[Tree]
InterProIPR011761. ATP-grasp.
IPR013650. ATP-grasp_succ-CoA_synth-type.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005811. CoA_ligase.
IPR017866. Succ-CoA_synthase_bsu_CS.
IPR005809. Succ_CoA_synthase_bsu.
IPR016102. Succinyl-CoA_synth-like.
[Graphical view]
Gene3DG3DSA:3.30.1490.20. ATP_grasp_subdomain_1. 1 hit.
G3DSA:3.30.470.20. ATP_grasp_subdomain_2. 1 hit.
G3DSA:3.40.50.261. Succinyl-CoA_synth-like. 1 hit.
KOK01903.
PANTHERPTHR11815. CoA_lig_beta. 1 hit.
PfamPF08442. ATP-grasp_2. 1 hit.
PF00549. Ligase_CoA. 1 hit.
[Graphical view]
PIRSFPIRSF001554. SucCS_beta. 1 hit.
SUPFAMSSF52210. CoA_ligase. 1 hit.
TIGRFAMsTIGR01016. SucCoAbeta. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
PS01217. SUCCINYL_COA_LIG_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSUCC_BAUCH
AccessionPrimary (citable) accession number: Q1LTZ4
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 30, 2006
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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