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Reviewed, UniProtKB/Swiss-Prot Q1LSP9 (PSD_BAUCH)

Last modified June 16, 2009. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Phosphatidylserine decarboxylase proenzyme
    EC=4.1.1.65
Cleaved into the following 2 chains:
    1- Recommended name:
            Phosphatidylserine decarboxylase alpha chain
    2- Recommended name:
            Phosphatidylserine decarboxylase beta chain
Gene names
Name: psd
Ordered Locus Names: BCI_0587
OrganismBaumannia cicadellinicola subsp. Homalodisca coagulata [Complete proteome] [HAMAP]
Taxonomic identifier374463 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Candidatus Baumannia

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Protein attributes

Sequence length292 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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General annotation (Comments)

Catalytic activity

Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00662

Cofactor

Pyruvoyl group By similarity.

Pathway

Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00662

Sequence similarities

Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily.

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Ontologies

Keywords
   Biological processPhospholipid biosynthesis
   LigandPyruvate
   Molecular functionDecarboxylase
Lyase
   PTMZymogen
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processphospholipid biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Molecular functionphosphatidylserine decarboxylase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 255255Phosphatidylserine decarboxylase beta chain By similarity
PRO_0000262093
Chain256 – 29237Phosphatidylserine decarboxylase alpha chain By similarity
PRO_0000262094

Sites

Site255 – 2562Cleavage (non-hydrolytic) By similarity

Amino acid modifications

Modified residue2561Pyruvic acid (Ser) By similarity

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Sequences

Sequence LengthMass (Da)Tools
Q1LSP9-1 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 89B9B9DB6782CCCB

FASTA29233,567
        10         20         30         40         50         60 
MLYIIKPFLQ KLRYLLQLLL TQIVGWSAEC HGSWFTRIII KLFILFYKVN MQESLQQDIA 

        70         80         90        100        110        120 
FYKTFNAFFI RYLNKNARPI NSNPSVIVQP ADGIISQLGT IQDHLILQAK KHFYSLEALL 

       130        140        150        160        170        180 
AGQTRIINYF RCGNFTTIYL SPRDYHRVHM PCNGVLRQMI YVPGNLFSVN PSMVTHVPNL 

       190        200        210        220        230        240 
FARNERVICL FDSNFGLIAQ ILVGATIVGS IATIWSGTVM PPREKVIKCW HYPKFGDKNA 

       250        260        270        280        290 
VILLKGQEMG YFKLGSTVIN LFRYGRIELC DHLYTNCITR VGLPLGYSNK KI

« Hide

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References

[1]"Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters."
Wu D., Daugherty S.C., Van Aken S.E., Pai G.H., Watkins K.L., Khouri H., Tallon L.J., Zaborsky J.M., Dunbar H.E., Tran P.L., Moran N.A., Eisen J.A.
PLoS Biol. 4:1079-1092(2006) [PubMed: 16729848] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000238 Genomic DNA. Translation: ABF13816.1.
RefSeqYP_589015.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4056145.
GenomeReviewsGene locus BCI_0587 in contig CP000238_GR.
KEGGbci:BCI_0587.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1LSP9.
OMAQ1LSP9. INQDEME.

Family and domain databases

HAMAPMF_00662.
[Tree]
InterProIPR003817. PS_Dcarbxylase.
IPR005221. PS_decarb.
[Graphical view]
PANTHERPTHR10067. PS_decarb. 1 hit.
PfamPF02666. PS_Dcarbxylase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00163. PS_decarb. 1 hit.
ProtoNetSearch...

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Entry information

Entry namePSD_BAUCH
AccessionPrimary (citable) accession number: Q1LSP9
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: May 30, 2006
Last modified: June 16, 2009
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

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Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents