Reviewed, UniProtKB/Swiss-Prot Q1LSJ4 (RPIA_BAUCH)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	BCI_0647

Organism

Baumannia cicadellinicola subsp. Homalodisca coagulata [Complete proteome] [HAMAP]

Taxonomic identifier

374463 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Candidatus Baumannia

Protein attributes

Sequence length	223 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 223	223	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000016903

Sequences

	Sequence		Length	Mass (Da)
	Q1LSJ4-1 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: 82AF0D789E0A9BA3	FASTA	223	23,903
	10 20 30 40 50 60 MMHEKLKKAV GWAALEYVSS GMIIGVGTGS TTDHFIDALG TVKHKIEGVV SSSEQSTTKL 70 80 90 100 110 120 KSMGILLFNL NDVDGLDIYV DGTDEINSNM QMIKGGGAAL TREKVLAAAA NKFICIADTS 130 140 150 160 170 180 KQVDILGNFP LPIEVIPMAH AWVARELVHL TGGLPKYRQG VITDNGNIIL DIYNLKILDA 190 200 210 220 IALEKIINNI PGVVTVGLFA NRCADIALIS SDLGIEEISR SIK

References

[1]

"Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters." Wu D., Daugherty S.C., Van Aken S.E., Pai G.H., Watkins K.L., Khouri H., Tallon L.J., Zaborsky J.M., Dunbar H.E., Tran P.L., Moran N.A., Eisen J.A. PLoS Biol. 4:1079-1092(2006) [PubMed: 16729848] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000238 Genomic DNA. Translation: ABF14024.1.
RefSeq	YP_589070.1.
3D structure databases
SMR	Q1LSJ4. Positions 1-220.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1LSJ4.
Genome annotation databases
GeneID	4056455.
GenomeReviews	Gene locus BCI_0647 in contig CP000238_GR.
KEGG	bci:BCI_0647.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HBG515603.
OMA	VFDLNSV.
PhylomeDB	Q1LSJ4.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_BAUCH

Accession

Primary (citable) accession number: Q1LSJ4

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	May 30, 2006
Last modified:	February 9, 2010
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)