Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q1LS30 (Q1LS30_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Rmet_0160 EMBL ABF07046.1
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF07046.1
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length513 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1LS30 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 66D08B8B35499EA7

FASTA51355,270
        10         20         30         40         50         60 
MTISKRLLLT LSIALLALLF VGIGGIWQMG ESEKRLEYFN DNTLGSVHDL NTVAESVAAM 

        70         80         90        100        110        120 
RIELYRHGLS EDAKGLAEIE QQFDEASKRF DRMIDKYERD DISDETDRAM LAADRAAVKH 

       130        140        150        160        170        180 
YRDQIPAFFE RSRTGDYAGA KQMLTAGELF KASLALRKTV AEHLEYNTKQ GGIAVENNKA 

       190        200        210        220        230        240 
QHARSVSISL SVIVITVALT AIMALMLFRR IRGSLAQIQG SLEYVSRTLD LDHRAAVDRL 

       250        260        270        280        290        300 
DEIGLTAQSF NTLLERVAGT LRDVRRSTDS VGVAAAQIAA GNTDLSSRTE QQAASLEETA 

       310        320        330        340        350        360 
SSMEQLSTTV RQNADNAQQA SSLASNAAQV ADQGNQAVNQ MVETMGAIST SSGRIAEITN 

       370        380        390        400        410        420 
MIEGIAFQTN ILALNAAVEA ARAGEQGRGF AVVAGEVRSL AQRSSSAAKE IKDLIEASAE 

       430        440        450        460        470        480 
TVRAGSEQAH GVGSTMTEIQ QAVRRVSDII TEISAASREQ STGIEQVGHA VGQMDQVTQQ 

       490        500        510 
NAALVEEAAA AAQSLDEQAS KLREMVGQFR MSV 

« Hide

References

[1]"Complete sequence of the chromosome of Ralstonia metallidurans CH34."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000352 Genomic DNA. Translation: ABF07046.1.
RefSeqYP_582315.1. NC_007973.1.

3D structure databases

ProteinModelPortalQ1LS30.
SMRQ1LS30. Positions 288-511.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266264.Rmet_0160.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF07046; ABF07046; Rmet_0160.
GeneID4036944.
KEGGrme:Rmet_0160.
PATRIC20284844. VBIRalMet4734_0539.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAQYVQENT.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK2777535.

Enzyme and pathway databases

BioCycCMET266264:GJ5G-162-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1LS30_RALME
AccessionPrimary (citable) accession number: Q1LS30
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: February 19, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)