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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Rmet_0460

Organism
Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciCMET266264:GJ5G-478-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported (EC:4.1.1.-Imported)
Gene namesi
Ordered Locus Names:Rmet_0460Imported
OrganismiRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)Imported
Taxonomic identifieri266264 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000002429 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266264.Rmet_0460.

Structurei

3D structure databases

ProteinModelPortaliQ1LR80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1LR80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKARKAGRSD NAREATGNDA EMGEGCPLHW FDADLGAFDD LERRVAEHPA
60 70 80 90 100
DFFAGQDFDP VGACATREAS FASVQIPEDP TAPQQHADHL LNDVFRHVMP
110 120 130 140 150
VASPTFVGHM TSSLPSFMPS LAKIVAALNQ NVVKLETSGA LTGLERQVIG
160 170 180 190 200
MLHHLVFARD DAFYAQWLHN AEHSLGAFCS GGTTANLTAL WASRNNTLRA
210 220 230 240 250
RDGFAGINQA GLVAALRHYG YAGLAIVVSE RGHYSLRKAA DILGIGRENL
260 270 280 290 300
VPVGVDEDGR MRVDLLRDTL RDLQQRNIRT VAIVGIAGTT ETGAVDPLDA
310 320 330 340 350
IADVAQEIGC HFHVDAAWGG ATLLSARERA RFAGIERADS VVIDAHKQFY
360 370 380 390 400
VPMGAGMVLF RDPAWTQDII QHANYIVRKG SVDLGRHTLE GSRGSAAVML
410 420 430 440 450
YANLHLLGRK GLAKLIDTGI DNAKYFASLI EQQPDFELDS RPQLCILTYR
460 470 480 490 500
YVPAPVRAAL LSASPEQREQ LLEALDALTI NIQEMQRDAG RSFVSRTQLT
510 520 530 540 550
SSQWGGRPIA VFRVVLANPD TTHEILQSLL EEQRGLAKQS PMLPALMAMV

GG
Length:552
Mass (Da):60,005
Last modified:May 30, 2006 - v1
Checksum:i1BA8376FFAFF156D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000352 Genomic DNA. Translation: ABF07346.1.
RefSeqiWP_011515334.1. NC_007973.1.
YP_582615.1. NC_007973.1.

Genome annotation databases

EnsemblBacteriaiABF07346; ABF07346; Rmet_0460.
KEGGirme:Rmet_0460.
PATRICi20285460. VBIRalMet4734_0845.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000352 Genomic DNA. Translation: ABF07346.1.
RefSeqiWP_011515334.1. NC_007973.1.
YP_582615.1. NC_007973.1.

3D structure databases

ProteinModelPortaliQ1LR80.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266264.Rmet_0460.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF07346; ABF07346; Rmet_0460.
KEGGirme:Rmet_0460.
PATRICi20285460. VBIRalMet4734_0845.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciCMET266264:GJ5G-478-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CH34 / ATCC 43123 / DSM 2839Imported.

Entry informationi

Entry nameiQ1LR80_RALME
AccessioniPrimary (citable) accession number: Q1LR80
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: April 1, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.