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Q1LR80 (Q1LR80_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.- EMBL ABF07346.1
Gene names
Ordered Locus Names:Rmet_0460 EMBL ABF07346.1
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF07346.1
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q1LR80 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 1BA8376FFAFF156D

FASTA55260,005
        10         20         30         40         50         60 
MKARKAGRSD NAREATGNDA EMGEGCPLHW FDADLGAFDD LERRVAEHPA DFFAGQDFDP 

        70         80         90        100        110        120 
VGACATREAS FASVQIPEDP TAPQQHADHL LNDVFRHVMP VASPTFVGHM TSSLPSFMPS 

       130        140        150        160        170        180 
LAKIVAALNQ NVVKLETSGA LTGLERQVIG MLHHLVFARD DAFYAQWLHN AEHSLGAFCS 

       190        200        210        220        230        240 
GGTTANLTAL WASRNNTLRA RDGFAGINQA GLVAALRHYG YAGLAIVVSE RGHYSLRKAA 

       250        260        270        280        290        300 
DILGIGRENL VPVGVDEDGR MRVDLLRDTL RDLQQRNIRT VAIVGIAGTT ETGAVDPLDA 

       310        320        330        340        350        360 
IADVAQEIGC HFHVDAAWGG ATLLSARERA RFAGIERADS VVIDAHKQFY VPMGAGMVLF 

       370        380        390        400        410        420 
RDPAWTQDII QHANYIVRKG SVDLGRHTLE GSRGSAAVML YANLHLLGRK GLAKLIDTGI 

       430        440        450        460        470        480 
DNAKYFASLI EQQPDFELDS RPQLCILTYR YVPAPVRAAL LSASPEQREQ LLEALDALTI 

       490        500        510        520        530        540 
NIQEMQRDAG RSFVSRTQLT SSQWGGRPIA VFRVVLANPD TTHEILQSLL EEQRGLAKQS 

       550 
PMLPALMAMV GG 

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References

[1]"Complete sequence of the chromosome of Ralstonia metallidurans CH34."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000352 Genomic DNA. Translation: ABF07346.1.
RefSeqYP_582615.1. NC_007973.1.

3D structure databases

ProteinModelPortalQ1LR80.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266264.Rmet_0460.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF07346; ABF07346; Rmet_0460.
GeneID4037248.
KEGGrme:Rmet_0460.
PATRIC20285460. VBIRalMet4734_0845.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAALGAFCS.
OrthoDBEOG6MSRZP.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycCMET266264:GJ5G-478-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1LR80_RALME
AccessionPrimary (citable) accession number: Q1LR80
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: January 22, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)