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Q1LQJ0 (Q1LQJ0_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
D-amino acid dehydrogenase small subunit 1 HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202
Gene names
Name:dadA2 EMBL ABF07586.1
Synonyms:dadA1 HAMAP MF_01202
Ordered Locus Names:Rmet_0700
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP]
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202

Catalytic activity

A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202

Cofactor

FAD By similarity. HAMAP MF_01202

Pathway

Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202

Subunit structure

Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202

Sequence similarities

Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Ontologies

Keywords
   LigandFAD HAMAP MF_01202
Flavoprotein HAMAP MF_01202
   Molecular functionOxidoreductase HAMAP MF_01202 EMBL ABF07586.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processalanine catabolic process

Inferred from electronic annotation. Source: HAMAP

   Molecular functionD-amino-acid dehydrogenase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding3 – 1715FAD By similarity HAMAP MF_01202

Sequences

Sequence LengthMass (Da)Tools
Q1LQJ0 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: C30A6C471CB31F96

FASTA42545,295
        10         20         30         40         50         60 
MRIAIVGAGV VGMTSAWRLA NDGHEVTVVE RHDGPGEETS FANGGQLSYS YVAPLAGPGV 

        70         80         90        100        110        120 
LSKVPGWLLD RDSPMRFRPS MDPSQWRWLL AFARACNASA SEAATRKLLR LSFYSRDLMQ 

       130        140        150        160        170        180 
AFVDRPDARQ EGGGFDFARS GKLIVHRDAA AYESACRLLD YQASLGCEQQ ALDRDATVAL 

       190        200        210        220        230        240 
EPALAGIRQG IVGAIHTPSE EVGDCHRFCV SLAHLLQGRP GVTLRFGTRV TGLVRAGDRV 

       250        260        270        280        290        300 
TGLRTDAGDI RADAVIVSGG IGSVPLLKPL GVRPMLWPLK GYSITVPIRQ GVLAPRISVT 

       310        320        330        340        350        360 
DFANKIVYAR IGDTLRVAGM ADIVRGGVVI DRERAQTLVT QTRAVFGDVS HGADLDALQP 

       370        380        390        400        410        420 
WAGLRPATPT GLPMIGESRI RGLWLNLGHG ALGFTLAMGS AGVLADRMAG RKPVVDAEDF 


SAALA

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References

[1]"Complete sequence of the chromosome of Ralstonia metallidurans CH34."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000352 Genomic DNA. Translation: ABF07586.1.
RefSeqYP_582855.1. NC_007973.1.

3D structure databases

ProteinModelPortalQ1LQJ0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1LQJ0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4037490.
GenomeReviewsGene locus Rmet_0700 in contig CP000352_GR.
KEGGrme:Rmet_0700.
PATRIC20285940. VBIRalMet4734_1083.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0665.
HOGENOMHBG729204.
OMAFTLAMGS.
PhylomeDBQ1LQJ0.
ProtClustDBPRK00711.

Enzyme and pathway databases

BioCycRMET266264:RMET_0700-MONOMER.

Family and domain databases

HAMAPMF_01202. DadA.
[Tree]
InterProIPR023080. D-aa_DH_ssu_DadA.
IPR006076. FAD-dep_OxRdtase.
[Graphical view]
KOK00285.
PfamPF01266. DAO. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1LQJ0_RALME
AccessionPrimary (citable) accession number: Q1LQJ0
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info