Q1LMI1 (Q1LMI1_RALME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase B, PLP-dependent EMBL ABF08645.1
EC=4.1.1.15 EMBL ABF08645.1

Gene names

Name:	gadB EMBL ABF08645.1
Ordered Locus Names:	Rmet_1766 EMBL ABF08645.1

Organism

Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF08645.1

Taxonomic identifier

266264 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus › Cupriavidus metallidurans

Protein attributes

Sequence length	460 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ABF08645.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1LMI1 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: 65F6E8AD4E912697	FASTA	460	52,338
	10 20 30 40 50 60 MSDMQEHKVT PYDQFNYEVP ENVFPREGIS ANAAAAIVIS DEWTDTNPML NMSSFVTTFA 70 80 90 100 110 120 EPEAREVAAR NIFKNYIDHD MYPRLFAMEG RMVRWLHELW NGPKGVEPYG TCTVGSSEAC 130 140 150 160 170 180 MLGGLAHKWN WRQRRQAEGK DATRPNMVTG GNVQIVWKKF LRYFDVEPRI VPLKPGNYCL 190 200 210 220 230 240 TAEDLDKYVD ENTICVVAIA GQTFTGEDDD IQGIHDWLDA YEKRTGISIP MHIDGASGGF 250 260 270 280 290 300 VNPFLYPDYK WDFRLPRVQS INASGHKYGL TPPGLGWVVF RERKIFNEEL VFYVNYLGGE 310 320 330 340 350 360 MPTATLNFSR NAFQVAVQYY QFLRLGFDGY KRVMQHTLDN AIFLRQQLVD SGYFDIMNTT 370 380 390 400 410 420 QRIPVVAVTL NKKYKNFNEF DVSNKVREKG WVLSAYTMPP NAESVTSLRV VVRPHVNHNV 430 440 450 460 AQLLANDIIN ACKFLEANGG NAKPPALHKH AEAQSTSLKC

References

[1]

"Complete sequence of the chromosome of Ralstonia metallidurans CH34." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000352 Genomic DNA. Translation: ABF08645.1.
RefSeq	YP_583914.1. NC_007973.1.
3D structure databases
ProteinModelPortal	Q1LMI1.
ModBase	Search...
Protein-protein interaction databases
STRING	266264.Rmet_1766.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF08645; ABF08645; Rmet_1766.
GeneID	4038568.
KEGG	rme:Rmet_1766.
PATRIC	20288152. VBIRalMet4734_2178.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	FRWRNNA.
ProtClustDB	CLSK921668.
Enzyme and pathway databases
BioCyc	CMET266264:GJ5G-1853-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1LMI1_RALME

Accession

Primary (citable) accession number: Q1LMI1

Entry history

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)