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Q1LH22 (Q1LH22_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:aer EMBL ABF10554.1
Ordered Locus Names:Rmet_3682 EMBL ABF10554.1
Encoded onPlasmid megaplasmid EMBL ABF10554.1
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF10554.1
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL ABF10554.1
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1LH22 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: BA4A651C7B61BD0B

FASTA55259,457
        10         20         30         40         50         60 
MRNNQPVTQR EHPLPPDVYL ISRTDLKGRI TFANRTFVEV SGFTSDELLG AAHNLVRHPD 

        70         80         90        100        110        120 
MPPEAFADLW DSLQAGKSWV GVVKNRCKNG DHYWVQATVT PTRVGDRVVG YTSVRSMASR 

       130        140        150        160        170        180 
EQIGAADAAY RRFRENRAGG LAIRDGAVVR TGLAGLVGRV TRITLKRRIL WAQLAGLVWF 

       190        200        210        220        230        240 
LAAIAGVHWL AEEQAAQLWP WLWGAFGFAV LSSFMAGSML VSRVERPVRE MLDFALRMGA 

       250        260        270        280        290        300 
GDLTSNFEHR SADEVGELSR AMRTMQRSLQ SVVNDIQGGM ASISAATHQV AAGNNDLSQR 

       310        320        330        340        350        360 
TEQQAASLEE TASSMEQLTS TVRQNADNAH QATRLAADAS ETAVRGGEAV GRVVQTMDEI 

       370        380        390        400        410        420 
NEASRKIVDI IGVIEGIAFQ TNILALNAAV EAARAAEQGR GFAVVAGEVR SLAQRSANAA 

       430        440        450        460        470        480 
KEIKGLIGNT VARVESGAEQ VSQAGATMDE IVQAVKRVTD IMGEISSASA EQSAGIEQVN 

       490        500        510        520        530        540 
EAVTQMDDVT QQNAALVEQA AAAAGSLEEQ AERLRESIST FRVSMQAEVR PPRKRQVATM 

       550 
GETGKEAGLV NA 

« Hide

References

[1]"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000353 Genomic DNA. Translation: ABF10554.1.
RefSeqYP_585823.1. NC_007974.2.

3D structure databases

ProteinModelPortalQ1LH22.
SMRQ1LH22. Positions 300-526.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266264.Rmet_3682.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF10554; ABF10554; Rmet_3682.
GeneID4040498.
KEGGrme:Rmet_3682.
PATRIC20292076. VBIRalMet4734_4089.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000148074.
KOK03776.
OMAHYSERAN.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycCMET266264:GJ5G-4081-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1LH22_RALME
AccessionPrimary (citable) accession number: Q1LH22
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: July 9, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)