Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Gene

aer

Organism
Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) (Ralstonia metallidurans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorImported
Gene namesi
Name:aerImported
Ordered Locus Names:Rmet_3682Imported
Encoded oniPlasmid megaplasmid CH34Imported
OrganismiCupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) (Ralstonia metallidurans)Imported
Taxonomic identifieri266264 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
Proteomesi
  • UP000002429 Componenti: Plasmid megaplasmid CH34

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei169 – 189HelicalSequence analysisAdd BLAST21
Transmembranei201 – 221HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ1LH22.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 60PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST36
Domaini222 – 274HAMPInterPro annotationAdd BLAST53
Domaini279 – 508Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili479 – 517Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000148074.
KOiK03776.
OMAiDATKEIH.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1LH22-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNNQPVTQR EHPLPPDVYL ISRTDLKGRI TFANRTFVEV SGFTSDELLG
60 70 80 90 100
AAHNLVRHPD MPPEAFADLW DSLQAGKSWV GVVKNRCKNG DHYWVQATVT
110 120 130 140 150
PTRVGDRVVG YTSVRSMASR EQIGAADAAY RRFRENRAGG LAIRDGAVVR
160 170 180 190 200
TGLAGLVGRV TRITLKRRIL WAQLAGLVWF LAAIAGVHWL AEEQAAQLWP
210 220 230 240 250
WLWGAFGFAV LSSFMAGSML VSRVERPVRE MLDFALRMGA GDLTSNFEHR
260 270 280 290 300
SADEVGELSR AMRTMQRSLQ SVVNDIQGGM ASISAATHQV AAGNNDLSQR
310 320 330 340 350
TEQQAASLEE TASSMEQLTS TVRQNADNAH QATRLAADAS ETAVRGGEAV
360 370 380 390 400
GRVVQTMDEI NEASRKIVDI IGVIEGIAFQ TNILALNAAV EAARAAEQGR
410 420 430 440 450
GFAVVAGEVR SLAQRSANAA KEIKGLIGNT VARVESGAEQ VSQAGATMDE
460 470 480 490 500
IVQAVKRVTD IMGEISSASA EQSAGIEQVN EAVTQMDDVT QQNAALVEQA
510 520 530 540 550
AAAAGSLEEQ AERLRESIST FRVSMQAEVR PPRKRQVATM GETGKEAGLV

NA
Length:552
Mass (Da):59,457
Last modified:May 30, 2006 - v1
Checksum:iBA4A651C7B61BD0B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000353 Genomic DNA. Translation: ABF10554.1.
RefSeqiWP_011518205.1. NC_007974.2.

Genome annotation databases

EnsemblBacteriaiABF10554; ABF10554; Rmet_3682.
GeneIDi24154700.
KEGGirme:Rmet_3682.
PATRICi20292076. VBIRalMet4734_4089.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000353 Genomic DNA. Translation: ABF10554.1.
RefSeqiWP_011518205.1. NC_007974.2.

3D structure databases

ProteinModelPortaliQ1LH22.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF10554; ABF10554; Rmet_3682.
GeneIDi24154700.
KEGGirme:Rmet_3682.
PATRICi20292076. VBIRalMet4734_4089.

Phylogenomic databases

HOGENOMiHOG000148074.
KOiK03776.
OMAiDATKEIH.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ1LH22_CUPMC
AccessioniPrimary (citable) accession number: Q1LH22
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: November 2, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.