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Q1LH21 (Q1LH21_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rmet_3683 EMBL ABF10555.1
Encoded onPlasmid megaplasmid EMBL ABF10555.1
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF10555.1
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length613 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL ABF10555.1
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1LH21 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 454FDFAE97B927E0

FASTA61364,628
        10         20         30         40         50         60 
MQWFNQLRVT TRLIAGFLVV SVIGAIIGLL GVVNMGRMTE WTGKIYNSDL QALKAVQDGN 

        70         80         90        100        110        120 
INLVYASRAQ IALLSASTMG ERATEREQIE KSLSTLETRV KSARDSFTTP QGQALFKQYE 

       130        140        150        160        170        180 
TLLPPFRERM QKYVELIGKQ PLDTSQFESI VFTESAELIK DSRALEDLLL KIVKRRDERA 

       190        200        210        220        230        240 
KANMDESTSV YNHSRVLMLA LVLGGLAVSV LLGGFLARQL SRQLGGEPGY AAAIAARIAE 

       250        260        270        280        290        300 
GDFSDAVNLR AGDRTSLLHA MDQMQQQLSR MVRDFKVSAE SIGSASSEIA AGNNDLSQRT 

       310        320        330        340        350        360 
EQQAASLEET ASSMAQLTST VRQNADNARQ ASGLAANASE TAVRGGEVVG RVVQTMGEIN 

       370        380        390        400        410        420 
DASRKIVDII GVIEGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRS LAQRSANAAK 

       430        440        450        460        470        480 
EIKTLIDNSV AQVDTGAALV SQAGTTMDEI VQAVKRVTDI MGEISAASAE QSSGIEQVNQ 

       490        500        510        520        530        540 
AVSQMDEVTQ QNAALVEQAA AAAGSLQDQA SRLMASVSGF RLSHGDDAVP ALAAPAPAVR 

       550        560        570        580        590        600 
PAARPSGAKR LPAPARPVRK TAAKAAGTAL AATSGAAAAV EESVEAADSQ LKRPAISAST 

       610 
TISASDNGDW SAF 

« Hide

References

[1]"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000353 Genomic DNA. Translation: ABF10555.1.
RefSeqYP_585824.1. NC_007974.2.

3D structure databases

ProteinModelPortalQ1LH21.
SMRQ1LH21. Positions 299-524.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266264.Rmet_3683.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF10555; ABF10555; Rmet_3683.
GeneID4040499.
KEGGrme:Rmet_3683.
PATRIC20292078. VBIRalMet4734_4090.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAVVNMGRM.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycCMET266264:GJ5G-4082-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1LH21_RALME
AccessionPrimary (citable) accession number: Q1LH21
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: July 9, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)