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Q1LFU3 (Q1LFU3_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphatidylserine decarboxylase proenzyme HAMAP MF_00662
EC=4.1.1.65 HAMAP MF_00662
Gene names
Name:psd HAMAP MF_00662 EMBL ABF10983.1
Ordered Locus Names:Rmet_4116
Encoded onPlasmid megaplasmid CH34
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP]
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00662 SAAS SAAS003817

Cofactor

Pyruvoyl group By similarity. HAMAP MF_00662 SAAS SAAS003817

Pathway

Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00662 SAAS SAAS003817

Sequence similarities

Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily. HAMAP MF_00662

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Site250 – 2512Cleavage (non-hydrolytic) By similarity HAMAP MF_00662

Amino acid modifications

Modified residue2511Pyruvic acid (Ser) By similarity HAMAP MF_00662

Sequences

Sequence LengthMass (Da)Tools
Q1LFU3 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 853FC73D65658126

FASTA28431,375
        10         20         30         40         50         60 
MSFSVLLQRL APLHLLTRIA GQLADCRQPW LAQYLIRTFV RRHKIDLDEA LVSDLATYPT 

        70         80         90        100        110        120 
FNEFFIRALR PGARPIAAAD WTSPVDGTIS QIGRVEAGQM IHAKQHAYSA TALLGDAALA 

       130        140        150        160        170        180 
KQLEGGCFST VYLSPRNYHR IHMPCEGRLL GMRHVPGKLY SVRPDIVEGI DGLLAINERL 

       190        200        210        220        230        240 
VCWFEHPQHG VFALVLVGAA IVGRIATVWH GLVEPKRSGQ VSEWHYADGA SAPQLKDLLQ 

       250        260        270        280 
GVEMGHFQLG STIVLLMPGS AWQYHPDWQV GQPVRLGQAI ASRG

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References

[1]"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000353 Genomic DNA. Translation: ABF10983.1.
RefSeqYP_586252.1. NC_007974.2.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ1LFU3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4040974.
GenomeReviewsGene locus Rmet_4116 in contig CP000353_GR.
KEGGrme:Rmet_4116.
PATRIC20292958. VBIRalMet4734_4524.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0688.
HOGENOMHBG302256.
OMASMATVWH.
PhylomeDBQ1LFU3.

Enzyme and pathway databases

BioCycRMET266264:RMET_4116-MONOMER.

Family and domain databases

HAMAPMF_00662. PS_decarb_type1.
[Tree]
InterProIPR003817. PS_Dcarbxylase.
IPR005221. PS_decarb.
[Graphical view]
KOK01613.
PANTHERPTHR10067. PS_decarb. 1 hit.
PfamPF02666. PS_Dcarbxylase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00163. PS_decarb. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1LFU3_RALME
AccessionPrimary (citable) accession number: Q1LFU3
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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