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Q1LFM4 (Q1LFM4_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:cheD EMBL ABF11052.1
Ordered Locus Names:Rmet_4185 EMBL ABF11052.1
Encoded onPlasmid megaplasmid CH34
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF11052.1
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length357 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL ABF11052.1
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1LFM4 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: D616F379B84B860A

FASTA35737,080
        10         20         30         40         50         60 
MRIRLGAAFG VVVVLVAVMM TLALGQITDE GTRGWLYGLG TAVAVFSVVC WARLASAIEA 

        70         80         90        100        110        120 
PLKEAEFIAE TVAAGDLSKD FETARGGDFG RLLGGLGEME DMLTDLVTRI KSASDSISSA 

       130        140        150        160        170        180 
SQQIAVGNTD LSQRTEEQAA TLQETASSMG ELTAMVRQNT ERARTANGLA ASASGIAERG 

       190        200        210        220        230        240 
GAIVGNVVET MDAISVSSRK VTDIIAVIEG IAFQTNILAL NAAVEAARAG EQGRGFAVVA 

       250        260        270        280        290        300 
GEVRTLAQRS AAAAKEINVL INDSARQVES GSALVGQAGQ TMEEIVQAVR RVTQILGEIA 

       310        320        330        340        350 
TASEHQSDGI EQVNVAVTQM DDVTQQNAAL VEQAAAASSA LAEQAQELQK VVGEFKL 

« Hide

References

[1]"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000353 Genomic DNA. Translation: ABF11052.1.
RefSeqYP_586321.1. NC_007974.2.

3D structure databases

ProteinModelPortalQ1LFM4.
SMRQ1LFM4. Positions 134-357.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266264.Rmet_4185.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF11052; ABF11052; Rmet_4185.
GeneID4041043.
PATRIC20293102. VBIRalMet4734_4596.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMAGEMEDML.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK768968.

Enzyme and pathway databases

BioCycCMET266264:GJ5G-4618-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1LFM4_RALME
AccessionPrimary (citable) accession number: Q1LFM4
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: February 19, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)