Q1LEX0 (Q1LEX0_RALME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase small subunit 3 HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202

Gene names

Name:	dadA3 HAMAP MF_01202 EMBL ABF11306.1
Ordered Locus Names:	Rmet_4441

Encoded on

Plasmid megaplasmid CH34

Organism

Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP]

Taxonomic identifier

266264 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus

Protein attributes

Sequence length	417 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202 SAAS SAAS023080
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202 SAAS SAAS023080
Cofactor	FAD By similarity. HAMAP MF_01202 SAAS SAAS023080
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202 SAAS SAAS023080
Sequence similarities	Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Ontologies

Keywords
Ligand	FAD HAMAP MF_01202 SAAS SAAS023080 Flavoprotein HAMAP MF_01202 SAAS SAAS023080
Molecular function	Oxidoreductase HAMAP MF_01202 SAAS SAAS023080 EMBL ABF11306.1
Technical term	Complete proteome Plasmid EMBL ABF11306.1
Gene Ontology (GO)
Biological process	alanine catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	3 – 17	15	FAD By similarity HAMAP MF_01202

Sequences

	Sequence		Length	Mass (Da)
	Q1LEX0 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: 75F60DF15A1EEED4	FASTA	417	44,600
	10 20 30 40 50 60 MRVCVLGGGV VGVASAYYLA REGHTVTLLE ARDELAQETS LANGAQLSYS YVAPLADPAV 70 80 90 100 110 120 LPKLPGWLLD RNSPLRFVPR LDWRQWTWCL EFLRACRTGV AKKVTAQLLG LGQLSRDGVH 130 140 150 160 170 180 ELVEREALHF NYQRNGKLVV YRDPVAFDGA RRQLEYQASL GSRQQALDAA ACVALEPALA 190 200 210 220 230 240 SVQHKLAGGI HTPSEEAGDC HAFTVGLAAA ATRRFGASFR CGTRVTGLRH AGRRVVAART 250 260 270 280 290 300 DAGDIEADAF VVAAGMQSVP MLAPLGVTLP LYPLTGYSLT APTQPGHHHP PAISVTDLHY 310 320 330 340 350 360 KVVYARLGER LRIAGMVDLI GRHPRADARR VALLARQARE TFPDGANFDA ATSWCGGRPA 370 380 390 400 410 TPDSKPLIGA TPYDNLWLNT GHGALGFTLA CGSAALLADA MAGRPSSLDA SAFALMR

References

[1]

"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000353 Genomic DNA. Translation: ABF11306.1.
RefSeq	YP_586575.1. NC_007974.2.
3D structure databases
ProteinModelPortal	Q1LEX0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1LEX0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4041300.
GenomeReviews	Gene locus Rmet_4441 in contig CP000353_GR.
KEGG	rme:Rmet_4441.
PATRIC	20293624. VBIRalMet4734_4856.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0665.
HOGENOM	HBG729204.
OMA	SEEAGDC.
PhylomeDB	Q1LEX0.
ProtClustDB	CLSK708524.
Enzyme and pathway databases
BioCyc	RMET266264:RMET_4441-MONOMER.
Family and domain databases
HAMAP	MF_01202. DadA. [Tree]
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. [Graphical view]
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1LEX0_RALME

Accession

Primary (citable) accession number: Q1LEX0

Entry history

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)