Q1LDZ3 (Q1LDZ3_RALME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative transcriptional regulator of the RpiR family EMBL ABF11633.1

Gene names

Ordered Locus Names:

Rmet_4771 EMBL ABF11633.1

Encoded on

Plasmid megaplasmid CH34

Organism

Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF11633.1

Taxonomic identifier

266264 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus › Cupriavidus metallidurans

Protein attributes

Sequence length	301 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid EMBL ABF11633.1
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1LDZ3 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: 80A4206DDFA67048	FASTA	301	32,488
	10 20 30 40 50 60 MTAPFDILTR IAERGPSLRL AEQKVAQVIL EDLAGAAAAS INELARKAAV SEASVTRFAK 70 80 90 100 110 120 AIGCRDVRDL KLRLAQATAV GSRFLQPAPG PVDTDAPAAL AERIHADVLA TLEVNRKLID 130 140 150 160 170 180 PERIDIAARL LLNARMVYAF GMGGGSTFMA DEARYRLARL GHPVATYHDA LLQKMVAATL 190 200 210 220 230 240 TRDDVVLAFS ASGSVPEILA SCDIAREYGA RLIAVTALGS PLAARADVLL PVRTLETDFI 250 260 270 280 290 300 FKPSASRYAM LMVLDVLSTR FALLQQEQSK EKLRRLKYVL DAHRGVSQDS DGPDSRQPLG D

References

[1]

"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000353 Genomic DNA. Translation: ABF11633.1.
RefSeq	YP_586902.1. NC_007974.2.
3D structure databases
ProteinModelPortal	Q1LDZ3.
ModBase	Search...
Protein-protein interaction databases
STRING	266264.Rmet_4771.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF11633; ABF11633; Rmet_4771.
GeneID	4041633.
KEGG	rme:Rmet_4771.
PATRIC	20294286. VBIRalMet4734_5185.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1737.
HOGENOM	HOG000027157.
OMA	PVATYQD.
ProtClustDB	CLSK897897.
Enzyme and pathway databases
BioCyc	CMET266264:GJ5G-5240-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR000281. HTH_RpiR. IPR001347. SIS. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF01418. HTH_6. 1 hit. PF01380. SIS. 1 hit. [Graphical view]
PROSITE	PS51071. HTH_RPIR. 1 hit. PS51464. SIS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1LDZ3_RALME

Accession

Primary (citable) accession number: Q1LDZ3

Entry history

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)