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Q1LDI2 (Q1LDI2_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.14.-.- EMBL ABF11794.1
Gene names
Name:thcB EMBL ABF11794.1
Ordered Locus Names:Rmet_4932 EMBL ABF11794.1
Encoded onPlasmid megaplasmid CH34
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF11794.1
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length780 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 2Fe-2S ferredoxin-type domain. RuleBase RU000392

Contains 2Fe-2S ferredoxin-type domain. SAAS SAAS017938

Contains FAD-binding FR-type domain. SAAS SAAS001041

Sequences

Sequence LengthMass (Da)Tools
Q1LDI2 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: D33B849874EAC55A

FASTA78086,356
        10         20         30         40         50         60 
MPQTNAPASS GSCPIDHSAL RAPNGCPISH QAAAFDPFED GYQQDPPEYV RWSRAQEPVF 

        70         80         90        100        110        120 
YSPKLGYWVV TRYDDIKAIF RDNITFSPSI ALEKITPTGE AANAVLASYG YAMNRTLVNE 

       130        140        150        160        170        180 
DEPAHMPRRR ALMEPFTPAE LAHHEPMVRK LTREYVDRFI DTGRADLVDE MLWEVPLTVA 

       190        200        210        220        230        240 
LHFLGVPEED MDLLRQYSIA HTVNTWGRPK PEEQVAVAHA VGNFWQLAGR ILDKMREDPS 

       250        260        270        280        290        300 
GPGWMQYGLR KQRELPEVVT DSYLHSMMMA GIVAAHETTA NASANAIKLL LQHPDVWREI 

       310        320        330        340        350        360 
CEDPALIPNA VEECLRHNGS VAAWRRLVTR DTEVGGMSLA AGSKLLIVTS SANHDEHHFA 

       370        380        390        400        410        420 
DADLFDIHRD NASDQLTFGY GSHQCMGKNL ARMEMQIFLE ELTSRLPHMR LAGQRFTYVP 

       430        440        450        460        470        480 
NTSFRGPEHL WVEWDPARNP ERTDPTVLAP RDAVRIGEPT GGTTGRTLIV ERVETAAQGV 

       490        500        510        520        530        540 
SRIRLVSPDG RALPRWSPGS HIDIECGHTG ISRQYSLCGD PADTSAFEIA VLREPESRGG 

       550        560        570        580        590        600 
SAWIHASLRA GDKLKVRGPR NHFRLDETCR RAIFIAGGIG VTPVSAMARR AKELGVDYTF 

       610        620        630        640        650        660 
HYCGRSRASM AMIDELRALH GDRVRIHAAD EGQRADLAQV LGAPDANTQI YACGPARMIE 

       670        680        690        700        710        720 
ALEALCATWP EDSLRVEHFS SKLGTLDPSR EQPFAVELKD SGLTLEVPPD QTLLATLRAA 

       730        740        750        760        770        780 
NIDVQSDCEE GLCGSCEVRV LAGEIDHRDV VLTRGERDAN NRMMACCSRA AKGGKIVLGL 

« Hide

References

[1]"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000353 Genomic DNA. Translation: ABF11794.1.
RefSeqYP_587063.1. NC_007974.2.

3D structure databases

ProteinModelPortalQ1LDI2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266264.Rmet_4932.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF11794; ABF11794; Rmet_4932.
GeneID4041794.
KEGGrme:Rmet_4932.
PATRIC20294616. VBIRalMet4734_5350.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2124.
HOGENOMHOG000227112.
OMAEDEPAHM.
OrthoDBEOG6PS5RG.
ProtClustDBCLSK929848.

Enzyme and pathway databases

BioCycCMET266264:GJ5G-5413-MONOMER.

Family and domain databases

Gene3D1.10.630.10. 1 hit.
3.10.20.30. 1 hit.
InterProIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR001128. Cyt_P450.
IPR002397. Cyt_P450_B.
IPR017972. Cyt_P450_CS.
IPR017927. Fd_Rdtase_FAD-bd.
IPR008333. OxRdtase_FAD-bd_dom.
IPR001433. OxRdtase_FAD/NAD-bd.
IPR017938. Riboflavin_synthase-like_b-brl.
[Graphical view]
PfamPF00970. FAD_binding_6. 1 hit.
PF00111. Fer2. 1 hit.
PF00175. NAD_binding_1. 1 hit.
PF00067. p450. 1 hit.
[Graphical view]
PRINTSPR00359. BP450.
SUPFAMSSF48264. SSF48264. 1 hit.
SSF54292. SSF54292. 1 hit.
SSF63380. SSF63380. 1 hit.
PROSITEPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
PS00086. CYTOCHROME_P450. 1 hit.
PS51384. FAD_FR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1LDI2_RALME
AccessionPrimary (citable) accession number: Q1LDI2
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: April 16, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)