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Q1LCG1 (Q1LCG1_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:tar EMBL ABF12165.1
Ordered Locus Names:Rmet_5306 EMBL ABF12165.1
Encoded onPlasmid megaplasmid CH34
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF12165.1
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length565 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL ABF12165.1
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1LCG1 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 412D8994CA3F3CDB

FASTA56559,690
        10         20         30         40         50         60 
MLNASHCDAT TSISPRNRQL GVAVKIRDLS IKTRLLAGFG ALALIVLVVS GLSLRALSQA 

        70         80         90        100        110        120 
TDGFSAYING LNARGEMASK VRTSVDRRAI AARNLVLVTT PADISLEKEA VLKAHDDVKA 

       130        140        150        160        170        180 
RLGQLNEMIK AEGVSETARN LVAEVDRIEA RYGPVATAIV ALALEGKRDA AIEKMNNECR 

       190        200        210        220        230        240 
PLLAELIKAT NTYASFTKER QDEMIRKLQD DYVAQRNLLI IVSLAAVAFA MTGGMLLTRA 

       250        260        270        280        290        300 
ITGPIERAVG VASTVARGEL GMRIEVNSTD ETGRLLGALR DMNERLSETV ARVREGSSSI 

       310        320        330        340        350        360 
AVATGQIAEG NMDLSSRTEQ QAASLEETAA SIEELAATVR HNTENARQAS ELARNATEVA 

       370        380        390        400        410        420 
QQGSSTVGRV VDTMEGISAS STKIAEITGI IEGIAFQTNI LALNAAVEAA RAGEQGRGFA 

       430        440        450        460        470        480 
VVASEVRGLA QRSSSAAKEI KELIDASVAQ VQAGSSLASE AGKTMTDVTQ AVARVTNIVD 

       490        500        510        520        530        540 
EIATASAEQN RGIEQVNQAI VQIDQVTQQN ASLVHEAAEA SKALEEQSRS LDDAVAFFKL 

       550        560 
PSGGGRLHDA HRAVVGQRTA GIAFT 

« Hide

References

[1]"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000353 Genomic DNA. Translation: ABF12165.1.

3D structure databases

ProteinModelPortalQ1LCG1.
SMRQ1LCG1. Positions 317-540.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266264.Rmet_5306.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF12165; ABF12165; Rmet_5306.
PATRIC20295380. VBIRalMet4734_5732.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK05874.
OMATYTHERE.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK716388.

Enzyme and pathway databases

BioCycCMET266264:GJ5G-5803-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1LCG1_RALME
AccessionPrimary (citable) accession number: Q1LCG1
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: April 16, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)