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Q1LBK5 (Q1LBK5_RALME) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:tar EMBL ABF12471.1
Ordered Locus Names:Rmet_5612 EMBL ABF12471.1
Encoded onPlasmid megaplasmid CH34
OrganismRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) [Complete proteome] [HAMAP] EMBL ABF12471.1
Taxonomic identifier266264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length513 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionReceptor EMBL ABF12471.1
   Technical termComplete proteome
Plasmid EMBL ABF12471.1
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1LBK5 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 59BBB2C2E738FDA5

FASTA51354,709
        10         20         30         40         50         60 
MKNLGIGVRL GIGFGVVLLL STFMTVLGVV RLEDVAGRTH AMMQQPLAKE RIVSDWYRLM 

        70         80         90        100        110        120 
YASVRRTTAI TRSSDPSLGQ FFAAETKTSA ETIAAMRDKI KPMLTSDAEK AAFERILVVR 

       130        140        150        160        170        180 
NPYNESRDKI AKLKQDGQAE DAIKVLETEF VPAGDAYLVE IQKLLDIQRT SIDATAEEIN 

       190        200        210        220        230        240 
RIYESARNGL IALGVIALAI GVAFAWWLTI GITRPLHRAV GFARTVAAGD LTGRIDVDSR 

       250        260        270        280        290        300 
DETGQLLAAL REMNENILGI VKEVRKGTEA IATGTSQIAA GNTDLSQRTE EQASSLQETA 

       310        320        330        340        350        360 
SSMEELTSIV RQNADSAKQA SGLAVNASDV ATQGGEVVGQ VVHTMDEINA ASRKVVEIIS 

       370        380        390        400        410        420 
VIEGIAFQTN ILALNAAVEA ARAGEQGRGF AVVAGEVRSL AQRSATAAKE IKSLIGDSAD 

       430        440        450        460        470        480 
RVERGSQLVA QAGQTMEEIV SAVKRVTDIM GEISAASVEQ SAGIEQVNQA VTQMDTVTQQ 

       490        500        510 
NAALVEQAAA AAGSLEEQAQ RLKEAVATFR LAA 

« Hide

References

[1]"Complete sequence of the megaplasmid of Ralstonia metallidurans CH34."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Mergeay M., Benotmane M.A., Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., van der Lelie D., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH34 / ATCC 43123 / DSM 2839.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000353 Genomic DNA. Translation: ABF12471.1.
RefSeqYP_587740.1. NC_007974.2.

3D structure databases

ProteinModelPortalQ1LBK5.
SMRQ1LBK5. Positions 288-511.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266264.Rmet_5612.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF12471; ABF12471; Rmet_5612.
GeneID4042476.
KEGGrme:Rmet_5612.
PATRIC20295950. VBIRalMet4734_6017.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAREMNENI.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK768734.

Enzyme and pathway databases

BioCycCMET266264:GJ5G-6139-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1LBK5_RALME
AccessionPrimary (citable) accession number: Q1LBK5
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: February 19, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)