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Protein

Optic atrophy 3 protein homolog

Gene

opa3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

May play some role in mitochondrial processes.By similarity

GO - Biological processi

  • locomotory behavior Source: ZFIN
  • musculoskeletal movement Source: ZFIN
  • regulation of buoyancy Source: ZFIN
  • regulation of lipid metabolic process Source: GO_Central
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Optic atrophy 3 protein homolog
Gene namesi
Name:opa3
ORF Names:si:dkey-12o15.3
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 18

Organism-specific databases

ZFINiZDB-GENE-050210-1. opa3.

Subcellular locationi

GO - Cellular componenti

  • mitochondrion Source: ZFIN
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 157157Optic atrophy 3 protein homologPRO_0000326548Add
BLAST

Proteomic databases

PaxDbiQ1L9A2.

Expressioni

Gene expression databases

BgeeiENSDARG00000061761.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000082921.

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili103 – 12927Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the OPA3 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG3335. Eukaryota.
ENOG4111J9C. LUCA.
GeneTreeiENSGT00390000009795.
HOGENOMiHOG000007385.
HOVERGENiHBG019109.
InParanoidiQ1L9A2.
OMAiYHWIEMR.
OrthoDBiEOG091G0W1R.
PhylomeDBiQ1L9A2.
TreeFamiTF314653.

Family and domain databases

InterProiIPR010754. OPA3-like.
[Graphical view]
PANTHERiPTHR12499. PTHR12499. 1 hit.
PfamiPF07047. OPA3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1L9A2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVGAFPIAK LLYLGVRQLS KPVANRIKAG ARRSEFFKNY ICLPPAQAYH
60 70 80 90 100
WIEMRTKMRI MGFRGSTIKP LNEDAAAELG AELLGEAIIF VIGGGCMVLE
110 120 130 140 150
YSRQAANSRR KEEELAQSIT SLQTQLGELA LTTETLDAQI REVNRLLLSL

PAAPSSK
Length:157
Mass (Da):17,306
Last modified:May 30, 2006 - v1
Checksum:i9223CBFCA08FEFBA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR377223 Genomic DNA. Translation: CAK05152.1.
RefSeqiNP_001073635.1. NM_001080166.1.
UniGeneiDr.80495.

Genome annotation databases

EnsembliENSDART00000088488; ENSDARP00000082921; ENSDARG00000061761.
GeneIDi497278.
KEGGidre:497278.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR377223 Genomic DNA. Translation: CAK05152.1.
RefSeqiNP_001073635.1. NM_001080166.1.
UniGeneiDr.80495.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000082921.

Proteomic databases

PaxDbiQ1L9A2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000088488; ENSDARP00000082921; ENSDARG00000061761.
GeneIDi497278.
KEGGidre:497278.

Organism-specific databases

CTDi80207.
ZFINiZDB-GENE-050210-1. opa3.

Phylogenomic databases

eggNOGiKOG3335. Eukaryota.
ENOG4111J9C. LUCA.
GeneTreeiENSGT00390000009795.
HOGENOMiHOG000007385.
HOVERGENiHBG019109.
InParanoidiQ1L9A2.
OMAiYHWIEMR.
OrthoDBiEOG091G0W1R.
PhylomeDBiQ1L9A2.
TreeFamiTF314653.

Miscellaneous databases

PROiQ1L9A2.

Gene expression databases

BgeeiENSDARG00000061761.

Family and domain databases

InterProiIPR010754. OPA3-like.
[Graphical view]
PANTHERiPTHR12499. PTHR12499. 1 hit.
PfamiPF07047. OPA3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiOPA3_DANRE
AccessioniPrimary (citable) accession number: Q1L9A2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: May 30, 2006
Last modified: September 7, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.