Q1L618 (Q1L618_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Procollagen lysine 2-oxoglutarate 5-dioxygenase 3 EMBL AAY84150.1

Submitted name:
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 EMBL AAI63451.1

Gene names

Name:	plod3 ZFIN ZDB-GENE-021031-4 EMBL AAI63451.1
Synonyms:	diwanka EMBL AAY84150.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAY84150.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	730 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Collagen EMBL AAY84150.1
Molecular function	Dioxygenase EMBL AAY84150.1 Oxidoreductase
Gene Ontology (GO)
Biological_process	motor neuron axon guidance Inferred from mutant phenotype PubMed 12482713Ref.1. Source: ZFIN
Cellular_component	collagen Inferred from electronic annotation. Source: UniProtKB-KW endoplasmic reticulum Inferred from electronic annotation. Source: InterPro
Molecular_function	L-ascorbic acid binding Inferred from electronic annotation. Source: InterPro iron ion binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Inferred from electronic annotation. Source: UniProtKB-KW procollagen-lysine 5-dioxygenase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1L618 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: 58082A84FE2ADC47	FASTA	730	84,911
	10 20 30 40 50 60 MTPVPVILTV ILAVIQPCRT EPRKPNELLV ITAATEVTDG YLRFMRTIRQ FNYTIQVLGL 70 80 90 100 110 120 GEQWRGGDVA RTVGGGQKVR WLKTELEKHK DKQNTVIMFV DSYDVILASG PVELLRKFSR 130 140 150 160 170 180 FSHRVVFSAE GFCWPDQRLA SKYPAVHHGK RYLNSGGFIG FAPEIHAIVQ QWKYKDDDDD 190 200 210 220 230 240 QLFYTRIYLD KEKRRKFNMT LDHRSQIFQN LNGAIEEVVL KFEKSRVRVR NVAYDTLPVV 250 260 270 280 290 300 IHGNGPTKLQ LNYLGNYVPT AWTYENGCGI CEEDLLDLSH LSDEEMPLVH VAVFIEQPMP 310 320 330 340 350 360 FLEEFLERLA TLNYPHTRIR LFLHNNVVYH EQHVERFWTR HRSLFTGARI VGPEENLKHD 370 380 390 400 410 420 QARTMAVEAC KKDVSCDYFF SLDADVALTN PDVLRILIEE NKSVIAPMLS RHGKLWSNFW 430 440 450 460 470 480 GALSPEGFYS RAEDYIDIVQ SKRVGLWNVP YITQVYLIRG ETLRSRLAAV SLYQQEGMDP 490 500 510 520 530 540 DMSFCKSVRE QGIFMFVSNR DEFGRLVSSA NYNISRLHPD MWQIFDNPVD WREKYIHENY 550 560 570 580 590 600 SRIFEDDESV VEQPCPDVYW FPAFSERMCD DLVETMEEFG QWSGGGHKDE RLSGGYENVP 610 620 630 640 650 660 TVDIHMNQIQ FEKEWLKFLK EYIVPVTEKL YPGYYPKAQA VMNFVVRYRP DEQPSLRPHH 670 680 690 700 710 720 DSSTFTINIA LNSKGVDYEG GGCRFLRYNC KVESPRKGWS FMHPGRLTHY HEGLPTTQGT 730 RYIMVSFVDP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The myotomal diwanka (lh3) glycosyltransferase and type XVIII collagen are critical for motor growth cone migration." Schneider V.A., Granato M. Neuron 50:683-695(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Pooled EMBL AAI63451.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC163451 mRNA. Translation: AAI63451.1. DQ019227 mRNA. Translation: AAY84150.1.
IPI	IPI00934159.
RefSeq	NP_001037808.1. NM_001044343.1.
UniGene	Dr.75149.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	7955.ENSDARP00000080246.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	556077.
KEGG	dre:556077.
Organism-specific databases
CTD	8985.
ZFIN	ZDB-GENE-021031-4. plod3.
Phylogenomic databases
eggNOG	NOG311199.
HOGENOM	HOG000231099.
HOVERGEN	HBG053618.
InParanoid	Q1L618.
KO	K13646.
OrthoDB	EOG4K0QMV.
Family and domain databases
InterPro	IPR005123. Oxoglu/Fe-dep_dioxygenase. IPR006620. Pro_4_hyd_alph. IPR001006. Procol_lys_dOase. [Graphical view]
Pfam	PF03171. 2OG-FeII_Oxy. 1 hit. [Graphical view]
SMART	SM00702. P4Hc. 1 hit. [Graphical view]
PROSITE	PS51471. FE2OG_OXY. 1 hit. PS01325. LYS_HYDROXYLASE. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20881304.

Entry information

Entry name

Q1L618_DANRE

Accession

Primary (citable) accession number: Q1L618

Entry history

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	April 3, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)