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Q1L618 (Q1L618_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 EMBL AAI63451.1
Gene names
Name:plod3 ZFIN ZDB-GENE-021031-4 EMBL AAI63451.1
Synonyms:diwanka EMBL AAY84150.1
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAY84150.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length730 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q1L618 [UniParc].

Last modified May 30, 2006. Version 1.
Checksum: 58082A84FE2ADC47

FASTA73084,911
        10         20         30         40         50         60 
MTPVPVILTV ILAVIQPCRT EPRKPNELLV ITAATEVTDG YLRFMRTIRQ FNYTIQVLGL 

        70         80         90        100        110        120 
GEQWRGGDVA RTVGGGQKVR WLKTELEKHK DKQNTVIMFV DSYDVILASG PVELLRKFSR 

       130        140        150        160        170        180 
FSHRVVFSAE GFCWPDQRLA SKYPAVHHGK RYLNSGGFIG FAPEIHAIVQ QWKYKDDDDD 

       190        200        210        220        230        240 
QLFYTRIYLD KEKRRKFNMT LDHRSQIFQN LNGAIEEVVL KFEKSRVRVR NVAYDTLPVV 

       250        260        270        280        290        300 
IHGNGPTKLQ LNYLGNYVPT AWTYENGCGI CEEDLLDLSH LSDEEMPLVH VAVFIEQPMP 

       310        320        330        340        350        360 
FLEEFLERLA TLNYPHTRIR LFLHNNVVYH EQHVERFWTR HRSLFTGARI VGPEENLKHD 

       370        380        390        400        410        420 
QARTMAVEAC KKDVSCDYFF SLDADVALTN PDVLRILIEE NKSVIAPMLS RHGKLWSNFW 

       430        440        450        460        470        480 
GALSPEGFYS RAEDYIDIVQ SKRVGLWNVP YITQVYLIRG ETLRSRLAAV SLYQQEGMDP 

       490        500        510        520        530        540 
DMSFCKSVRE QGIFMFVSNR DEFGRLVSSA NYNISRLHPD MWQIFDNPVD WREKYIHENY 

       550        560        570        580        590        600 
SRIFEDDESV VEQPCPDVYW FPAFSERMCD DLVETMEEFG QWSGGGHKDE RLSGGYENVP 

       610        620        630        640        650        660 
TVDIHMNQIQ FEKEWLKFLK EYIVPVTEKL YPGYYPKAQA VMNFVVRYRP DEQPSLRPHH 

       670        680        690        700        710        720 
DSSTFTINIA LNSKGVDYEG GGCRFLRYNC KVESPRKGWS FMHPGRLTHY HEGLPTTQGT 

       730 
RYIMVSFVDP 

« Hide

References

« Hide 'large scale' references
[1]"The myotomal diwanka (lh3) glycosyltransferase and type XVIII collagen are critical for motor growth cone migration."
Schneider V.A., Granato M.
Neuron 50:683-695(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC163451 mRNA. Translation: AAI63451.1.
DQ019227 mRNA. Translation: AAY84150.1.
RefSeqNP_001037808.1. NM_001044343.1.
UniGeneDr.75149.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000080246.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID556077.
KEGGdre:556077.

Organism-specific databases

CTD8985.
ZFINZDB-GENE-021031-4. plod3.

Phylogenomic databases

eggNOGNOG311199.
HOGENOMHOG000231099.
HOVERGENHBG053618.
InParanoidQ1L618.
KOK13646.

Family and domain databases

InterProIPR029044. Nucleotide-diphossugar_trans.
IPR005123. Oxoglu/Fe-dep_dioxygenase.
IPR006620. Pro_4_hyd_alph.
IPR001006. Procol_lys_dOase.
[Graphical view]
PfamPF03171. 2OG-FeII_Oxy. 1 hit.
[Graphical view]
SMARTSM00702. P4Hc. 1 hit.
[Graphical view]
SUPFAMSSF53448. SSF53448. 1 hit.
PROSITEPS51471. FE2OG_OXY. 1 hit.
PS01325. LYS_HYDROXYLASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20881304.

Entry information

Entry nameQ1L618_DANRE
AccessionPrimary (citable) accession number: Q1L618
Entry history
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: July 9, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)