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Unreviewed, UniProtKB/TrEMBL Q1JR81 (Q1JR81_COCNU)

Last modified January 19, 2010. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Glucan 1,3-beta glucosidase EMBL CAK18899.1
    EC=3.2.1.58 EMBL CAK18899.1
Gene names
Name: pr2 EMBL CAK18899.1
OrganismCocos nucifera (Coconut) EMBL CAK18899.1
Taxonomic identifier13894 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Arecaceae › Arecoideae › Cocoseae › Attaleinae › Cocos

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Protein attributes

Sequence length179 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

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Ontologies

Keywords
   Molecular functionGlycosidase EMBL CAK18899.1
Hydrolase
Gene Ontology (GO)
   Biological processmetabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionglucan 1,3-beta-glucosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CAK18899.1
Non-terminal residue1791 EMBL CAK18899.1

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Sequences

Sequence LengthMass (Da)Tools
Q1JR81-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 8134D6D8057358BD

FASTA17919,318
        10         20         30         40         50         60 
TAGGTERHWG LLYPNATRVY EVDLTGRLPD AGYGPLPPPG NNKPYKGKIW CVFGRRGKSV 

        70         80         90        100        110        120 
NATAVGSAIS YACGQGKGTC DAIQPGGPCY RPDSLTAHAS YAFNSYWQQF RRSGGTCYFN 

       130        140        150        160        170 
GLAVQAAQDP SYGSCKFPSI LRRIHVFHFV KAGDGSFGAP LGGDVWHLIE VIFNLLARI

« Hide

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References

[1]"Clonacion de genes expresados durante la induccion de sistemas de defensa en calloa de Cocos nucifera L. tratados con quitosan."
Gomez-Uc E.
Thesis (2006), Department of Departamento de Quimica-Bioquimica, Instituto Tecnologico de Merida, Merida, Yucatan, Mexico
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Callus EMBL CAK18899.1.
[2]"Chitosan treatment of Cocos nucifera calli as a model to study plant-pathogen molecular interactions."
Ivan Alfredo E.M., Gabriel L.U., Ramon S.P., Carlos O.S., Ignacio I.F., Jose Juan Z.A.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Callus EMBL CAK18899.1.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM262977 mRNA. Translation: CAK18899.1.

3D structure databases

SMRQ1JR81. Positions 34-140.
ModBaseSearch...

Protein family/group databases

CAZyCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Family and domain databases

InterProIPR012946. X8.
[Graphical view]
PfamPF07983. X8. 1 hit.
[Graphical view]
SMARTSM00768. X8. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ1JR81_COCNU
AccessionPrimary (citable) accession number: Q1JR81
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: January 19, 2010
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information