Q1JPX0 (Q1JPX0_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sp5 transcription factor-like EMBL AAI16568.1

Gene names

Name:

sp5l ZFIN ZDB-GENE-030131-2981

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI16568.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	357 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	anterior/posterior pattern specification Inferred from mutant phenotype. Source: ZFIN hindbrain development Inferred from mutant phenotype. Source: ZFIN mesoderm formation Inferred from mutant phenotype. Source: ZFIN notochord development Inferred from genetic interaction. Source: ZFIN regulation of transcription, DNA-dependent Inferred from mutant phenotype. Source: ZFIN tail morphogenesis Inferred from genetic interaction. Source: ZFIN
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1JPX0 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 1FC3969C247C8E3C	FASTA	357	39,760
	10 20 30 40 50 60 MAALTLSRAD NFLHNFLQDR TPSSSPESGP NTLSFLATTC SQAWQEGSQL PYEGPVGSAS 70 80 90 100 110 120 SMFQLWSNDV APNSSLSAHQ MTFTVPKMQF PSHMQPTLGS HSHHHHHHHH HHHELPLTPP 130 140 150 160 170 180 AEPPSAYSFE LSPVKMQGNA PYYTQHNAVS QNFPSFLQNP SGRAHLPGGH VEDGQQWWSL 190 200 210 220 230 240 PQGNSAPSGH PFSLGRQLVL GHQPQIAALL QGTSKGLLSS TRRCRRCKCP NCQSTGNGGA 250 260 270 280 290 300 ALELGKKRLH ICHIPDCGKV YKKTSHLKAH LRWHAGERPF ICNWLFCGKS FTRSDELQRH 310 320 330 340 350 LRTHTGEKRF GCQQCGKRFM RSDHLSKHVK THQSRKSRSS QPPHSGTDAL LSNIKRE

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Embryo EMBL AAI16568.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC116567 mRNA. Translation: AAI16568.1.
IPI	IPI00483367.
UniGene	Dr.78445.
3D structure databases
ProteinModelPortal	Q1JPX0.
SMR	Q1JPX0. Positions 242-336.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1JPX0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
ZFIN	ZDB-GENE-030131-2981. sp5l.
Phylogenomic databases
eggNOG	fiNOG05159.
HOGENOM	HBG446684.
HOVERGEN	HBG014797.
InParanoid	Q1JPX0.
OrthoDB	EOG4RV2RK.
Gene expression databases
ArrayExpress	Q1JPX0.
Bgee	Q1JPX0.
Family and domain databases
InterPro	IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. [Graphical view]
Gene3D	G3DSA:3.30.160.60. Znf_C2H2/integrase_DNA-bd. 3 hits.
Pfam	PF00096. zf-C2H2. 3 hits. [Graphical view]
SMART	SM00355. ZnF_C2H2. 3 hits. [Graphical view]
PROSITE	PS00028. ZINC_FINGER_C2H2_1. 3 hits. PS50157. ZINC_FINGER_C2H2_2. 3 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1JPX0_DANRE

Accession

Primary (citable) accession number: Q1JPX0

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	October 19, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)