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Q1J3W9 (Q1J3W9_DEIGD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Shikimate dehydrogenase EMBL ABF43809.1
Gene names
Ordered Locus Names:Dgeo_2374
Encoded onPlasmid pDSM11300
OrganismDeinococcus geothermalis (strain DSM 11300) [Complete proteome] [HAMAP]
Taxonomic identifier319795 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length289 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1J3W9 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: B737C8364514518E

FASTA28930,655
        10         20         30         40         50         60 
MSKRRLLAGL IGSGIQKSLS PALHEAEGDA QGLRIMYQRL DLDVLHCTPD DLPELLRAAE 

        70         80         90        100        110        120 
LAGFAGLNIT HPCKQRVIAH LDALSPVAEA LGAVNTVVLR DGQRVGHNTD AWGWSQGFQK 

       130        140        150        160        170        180 
GLPDADLGHA VQLGAGGAGA AVAYAALELG VQRLTLIDLD PARAEALAAR LAAQFPDRQV 

       190        200        210        220        230        240 
EASQDLASAV SQASGVIHAT PTGMLAHPGL PFDPELLRPG MWLSEVVYVP LETELLRAAR 

       250        260        270        280 
ARGCHTVHGG YMAVFQAARA FELFSGLVPD LGRMLAHFEA LIQSNEAVR

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References

[1]"Complete sequence of plasmid 1 of Deinococcus geothermalis DSM 11300."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Daly M.J., Fredrickson J.K., Makarova K.S., Gaidamakova E.K., Zhai M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000358 Genomic DNA. Translation: ABF43809.1.
RefSeqYP_593883.1. NC_008010.2.

3D structure databases

ProteinModelPortalQ1J3W9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1J3W9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4073602.
GenomeReviewsGene locus Dgeo_2374 in contig CP000358_GR.
KEGGdge:Dgeo_2374.
NMPDRfig|68909.1.peg.681.
PATRIC21620896. VBIDeiGeo41128_0107.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0169.
HOGENOMHBG553408.
OMAHEHEGDA.
ProtClustDBPRK12549.

Family and domain databases

InterProIPR016040. NAD(P)-bd_dom.
IPR003462. ODC_Mu_crystall.
IPR013708. Shikimate_DH-bd_N.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00014.
PfamPF02423. OCD_Mu_crystall. 1 hit.
PF08501. Shikimate_dh_N. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1J3W9_DEIGD
AccessionPrimary (citable) accession number: Q1J3W9
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: December 14, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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