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Q1J157 (Q1J157_DEIGD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha amylase, catalytic region EMBL ABF44777.1
Gene names
Ordered Locus Names:Dgeo_0475 EMBL ABF44777.1
OrganismDeinococcus geothermalis (strain DSM 11300) [Complete proteome] [HAMAP] EMBL ABF44777.1
Taxonomic identifier319795 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus ›

Protein attributes

Sequence length608 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-glucosidase activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1J157 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 59517F8065E3C312

FASTA60868,704
        10         20         30         40         50         60 
MNIIFADLPA THDHTPAYTS RLGAAVGELV TLRLKTTLPV IAVFLKLLEH GEITTHPARE 

        70         80         90        100        110        120 
IGPLDGEGRW FEFDLRLHAR RVHYAWQLQT AEDNWHFTMA GLHHTRRPYR DWFHYVADYQ 

       130        140        150        160        170        180 
APTWVWKSVF YQIFPDRFRN GNPANDVQTG EYVYSGAPVV HVPWDVPPTR ELDIHAHYGG 

       190        200        210        220        230        240 
DLEGVAQAMP YLADLGVNAL WLTPIFVSPS AHRYDITDYR TIDPHLGGEA AFGEMLRAAN 

       250        260        270        280        290        300 
AYGIRIVLDG VFNHTGSEHA LFQRALHDAS APERELFTFR EATGGKPPYA AFFDVPTLPK 

       310        320        330        340        350        360 
IDYRSAVAVN EFLAGEESVV RFWLRRGAAG WRLDVAQQIG RGGTDEGNLE LHRQLKQAAR 

       370        380        390        400        410        420 
EERPDAYIFG ERFFDSEAAL TGEGEDGVMN YHGFGLPLME WFAGEHYLGF RSRMTTAELL 

       430        440        450        460        470        480 
DLLWDAYHVL APQLALNQFN LLDSHDIPRA LSRLGENKTK LRAALTLLMG YPGVPCLYYG 

       490        500        510        520        530        540 
TEIGLSQLER GLMPFNRAPM PWDETRWDLD LRGFVQALIR VRRSARVLQE GALRFLLEES 

       550        560        570        580        590        600 
DALGYLRAYT HPDGRRELAA VLGSRRGSQH EVTVTLPRGD WRDALTGELV SRGGETRLDV 


AQGRLLLA

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References

[1]"Complete sequence of chromosome 1 of Deinococcus geothermalis DSM 11300."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Daly M.J., Fredrickson J.K., Makarova K.S., Gaidamakova E.K., Zhai M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11300.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000359 Genomic DNA. Translation: ABF44777.1.
RefSeqYP_603946.1. NC_008025.1.

3D structure databases

ProteinModelPortalQ1J157.
ModBaseSearch...

Protein-protein interaction databases

STRING319795.Dgeo_0475.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF44777; ABF44777; Dgeo_0475.
GeneID4057906.
KEGGdge:Dgeo_0475.
PATRIC21622783. VBIDeiGeo41128_1035.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000055363.
KOK01187.
OMAHDHTPAY.
ProtClustDBCLSK701705.

Enzyme and pathway databases

BioCycDGEO319795:GHMU-746-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.20.20.80. 1 hit.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR017069. MalZ.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036918. Maltodextrin_glucosidase. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1J157_DEIGD
AccessionPrimary (citable) accession number: Q1J157
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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