Q1J0S1 (Q1J0S1_DEIGD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isoamylase / pullulanase EMBL ABF44913.1
EC=3.2.1.41 EMBL ABF44913.1

Gene names

Ordered Locus Names:

Dgeo_0611

Organism

Deinococcus geothermalis (strain DSM 11300) [Complete proteome] [HAMAP]

Taxonomic identifier

319795 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	496 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABF44913.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro pullulanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1J0S1 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 086F343B7456FD1D	FASTA	496	55,721
	10 20 30 40 50 60 MPPSTPSSEA HPLTPEWVAD AVFYQIFPDR FARSGRVPGL NLQPWGSPPQ VHGYMGGDLW 70 80 90 100 110 120 GVTQHLDHIG ALGVNAIYFC PVFQSASNHR YHTHDYYRVD PMLGGNEALR ALIEAAHARG 130 140 150 160 170 180 IRIVLDGVFN HASRGFFQFN DLLEQGEASA YRDWFHVEGW PLHAYDDTRP ANYQAWWGLR 190 200 210 220 230 240 ALPKFNTGNP AVREFLWDVG TYWMEFGIDG WRLDVPNEID DDEFWREFRR RVKAINPDAY 250 260 270 280 290 300 IVGEIWGDAH RWLAGDQFDA VMNYHFTRPC LAFFAARTLA QAANESTGLG RVEPLDAAAF 310 320 330 340 350 360 ARRMTEITAL YHPEIVRAQL NLLDSHDTAR FLTAAGGDAT AFRLASIFQM TYVGAPCIYY 370 380 390 400 410 420 GDEIGLPGGP DPDCRRAFPW HDEASWDKET LSLLQKLTAT RHATPALRRG AFRFTHAEGE 430 440 450 460 470 480 ALVYVREHAA GNAYIAINAA QAPARLPLSD VQPGRYRDAL SGQRHELSGE TEVEVPGRAA 490 VVLVRAEEDS RHTARH

References

[1]

"Complete sequence of chromosome 1 of Deinococcus geothermalis DSM 11300." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Daly M.J., Fredrickson J.K., Makarova K.S., Gaidamakova E.K., Zhai M., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000359 Genomic DNA. Translation: ABF44913.1.
RefSeq	YP_604082.1. NC_008025.1.
3D structure databases
ProteinModelPortal	Q1J0S1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1J0S1.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4058061.
GenomeReviews	Gene locus Dgeo_0611 in contig CP000359_GR.
KEGG	dge:Dgeo_0611.
NMPDR	fig|68909.1.peg.914.
PATRIC	21623071. VBIDeiGeo41128_1177.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	FHINEYP.
PhylomeDB	Q1J0S1.
ProtClustDB	CLSK444894.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01234.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1J0S1_DEIGD

Accession

Primary (citable) accession number: Q1J0S1

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)