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Q1IZQ3

- GLGB_DEIGD

UniProt

Q1IZQ3 - GLGB_DEIGD

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene
glgB, Dgeo_0981
Organism
Deinococcus geothermalis (strain DSM 11300)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei322 – 3221Nucleophile By similarity
Active sitei373 – 3731Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciDGEO319795:GHMU-1003-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:Dgeo_0981
OrganismiDeinococcus geothermalis (strain DSM 11300)
Taxonomic identifieri319795 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
ProteomesiUP000002431: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6526521,4-alpha-glucan branching enzyme GlgBUniRule annotationPRO_0000260650Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi319795.Dgeo_0981.

Structurei

3D structure databases

ProteinModelPortaliQ1IZQ3.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1IZQ3-1 [UniParc]FASTAAdd to Basket

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MLDPLRASSP ATLALMSSLP LPLDHGHLQK LVTADLVRPD HLLGAHPVTE    50
NGVEGVRFAV WAPRAQHVSV VGDFNGWNGF DHPMQRLDFG FWGAFVPSAR 100
PGQRYKFRVT GADGRTVDKM DPYGAFTEVR PNTASIIWPL AFEWTDDAWM 150
QKRTPGFDRP ISIYEVHVGS WARRDDGWFL NYRELAHRLA DYVTFMGYTH 200
VELLGVMEHP FDGSWGYQVT GYYAPTSRLG APEDFAYLVN HLHERGIGVI 250
VDWVPGHFPT DEAGLAHFDG APLYEYSDPR KGYHYDWNTY IFDYGRNEVM 300
MFLIGSALKW LQDFHVDGLR VDAVASMLYL DFSRTEWVPN IHGGRENLEA 350
IAFLKRLNEV VHHMAPGCMM IAEESTAFPG VTSPTPFGLG FDYKWAMGWM 400
NDTLYYFEQD PLWRKYHHHK LTFFNVYRTG ENYILAISHD EVVHLKKAMV 450
SKMPGDWYMQ RAGYRAFLAM MWTTPGKKLL FMGQEFAQGT EWNHDEALPW 500
DVTDLPEHRG VMNLVRRLNG LYRERPDLHI GDTWEEGQLW VSADDTDNSV 550
YAYIRRDPRP QAEGGGAWSL AVANLTPVYR EGYPIGVPQG GEYRVLLSTD 600
DGEYGGFGTQ QPDLTAKEEG WNGQTHHLRL NLPPMSVLLL EHVGVTPRSE 650
DR 652
Length:652
Mass (Da):74,437
Last modified:June 13, 2006 - v1
Checksum:i4E6C502E4EE2D41E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000359 Genomic DNA. Translation: ABF45281.1.
RefSeqiYP_604450.1. NC_008025.1.

Genome annotation databases

EnsemblBacteriaiABF45281; ABF45281; Dgeo_0981.
GeneIDi4058678.
KEGGidge:Dgeo_0981.
PATRICi21623847. VBIDeiGeo41128_1560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000359 Genomic DNA. Translation: ABF45281.1 .
RefSeqi YP_604450.1. NC_008025.1.

3D structure databases

ProteinModelPortali Q1IZQ3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 319795.Dgeo_0981.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABF45281 ; ABF45281 ; Dgeo_0981 .
GeneIDi 4058678.
KEGGi dge:Dgeo_0981.
PATRICi 21623847. VBIDeiGeo41128_1560.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci DGEO319795:GHMU-1003-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 11300.

Entry informationi

Entry nameiGLGB_DEIGD
AccessioniPrimary (citable) accession number: Q1IZQ3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: June 13, 2006
Last modified: June 11, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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