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Q1IZ27 (Q1IZ27_DEIGD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Dgeo_1210 EMBL ABF45507.1
OrganismDeinococcus geothermalis (strain DSM 11300) [Complete proteome] [HAMAP] EMBL ABF45507.1
Taxonomic identifier319795 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus

Protein attributes

Sequence length861 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subunit structure

Homohexamer. The oligomerization is ATP-dependent By similarity. SAAS SAAS018368

Subcellular location

Cytoplasm By similarity SAAS SAAS018368.

Sequence similarities

Belongs to the clpA/clpB family. RuleBase RU004432

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q1IZ27 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 4108BE718892B60C

FASTA86195,751
        10         20         30         40         50         60 
MGAIEEEITL NPERFTEAAL QAIAQAQQLA QANQQQTLTV AHVLRALLDN DTAARALSAA 

        70         80         90        100        110        120 
GGNLQAIRQA LDAEIAKLPR VQGGGEQLYL DPALNRALQG AEKQAQTLGD AFIAADTLLL 

       130        140        150        160        170        180 
ALRAESRTPG LPSAAALQQA VTEARKGKTV TTKTAEQQFD ALEKYGTDLT QRARDGKFDP 

       190        200        210        220        230        240 
VIGRDEEIRR VMQILLRRTK NNPVLIGEPG VGKTAIVEGL AIRIVKGDVP EGLKNKRIVS 

       250        260        270        280        290        300 
LDMGSLLAGA KFRGEFEERL KAVIEEVVQS AGEVILFVDE LHTIVGAGKT EGSPDAGNML 

       310        320        330        340        350        360 
KPALARGELH MIGATTLSEY REIEKDPALE RRFQPVFVDE PSVEDTISIL RGIKEKYQAH 

       370        380        390        400        410        420 
HNVNLTDPAL VAAAQLSHRY ITDRQLPDKA IDLIDEAAAR LRMALESSPE RIDQLERRKL 

       430        440        450        460        470        480 
QLEIEREALK KEKDVDSQNR LLDIEDQLKA ITDELAEVRS RWEAERQEVQ ALREKRDQLD 

       490        500        510        520        530        540 
QVRTEIEKAR REYDLGKAAQ LEYGTLPQLE KDVQELERKL KAAEFAHMEV TDEDIASVVS 

       550        560        570        580        590        600 
RWTGIPVSKL MEGEREKLLR LEEQLHERVI GQDRAIVSVA DAIRRARAGL NDPNRPLGSF 

       610        620        630        640        650        660 
MFLGPTGVGK TELAKALAEF LFDSPDAMIR IDMSEYMEKH SVARLIGAPP GYVGYEEGGQ 

       670        680        690        700        710        720 
LTEAVRRRPY SVILLDEIEK AHPDVFNVLL QVLDDGRLTD GQGRTVDFRN TLIIMTSNIG 

       730        740        750        760        770        780 
SHLILEAQAR GDSPESIREQ VLQVLQAHFR PEFLNRIDDI IVFDALTPAN LHKIVEIQLG 

       790        800        810        820        830        840 
GLRRRLAERR VTLHLTDAAK DKLAQIGYDP AFGARPLKRV IAREIETPLA REILQGRVPE 

       850        860 
GSTLTVDYDG NQFRFETGVL N 

« Hide

References

[1]"Complete sequence of chromosome 1 of Deinococcus geothermalis DSM 11300."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Daly M.J., Fredrickson J.K., Makarova K.S., Gaidamakova E.K., Zhai M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11300.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000359 Genomic DNA. Translation: ABF45507.1.
RefSeqYP_604676.1. NC_008025.1.

3D structure databases

ProteinModelPortalQ1IZ27.
SMRQ1IZ27. Positions 13-847.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING319795.Dgeo_1210.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF45507; ABF45507; Dgeo_1210.
GeneID4057720.
KEGGdge:Dgeo_1210.
PATRIC21624309. VBIDeiGeo41128_1791.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0542.
HOGENOMHOG000218211.
KOK03695.
OMATRIEKDP.
OrthoDBEOG65F8SM.
ProtClustDBCLSK444852.

Enzyme and pathway databases

BioCycDGEO319795:GHMU-1232-MONOMER.

Family and domain databases

Gene3D1.10.1780.10. 1 hit.
3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR013093. ATPase_AAA-2.
IPR003959. ATPase_AAA_core.
IPR017730. Chaperonin_ClpB.
IPR019489. Clp_ATPase_C.
IPR004176. Clp_N.
IPR001270. ClpA/B.
IPR018368. ClpA/B_CS1.
IPR028299. ClpA/B_CS2.
IPR023150. Dbl_Clp-N.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00004. AAA. 1 hit.
PF07724. AAA_2. 1 hit.
PF02861. Clp_N. 2 hits.
PF10431. ClpB_D2-small. 1 hit.
[Graphical view]
PRINTSPR00300. CLPPROTEASEA.
SMARTSM00382. AAA. 2 hits.
SM01086. ClpB_D2-small. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 2 hits.
TIGRFAMsTIGR03346. chaperone_ClpB. 1 hit.
PROSITEPS00870. CLPAB_1. 1 hit.
PS00871. CLPAB_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1IZ27_DEIGD
AccessionPrimary (citable) accession number: Q1IZ27
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: April 16, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)