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Protein

Alkyl hydroperoxide reductase AhpD

Gene

Dgeo_1446

Organism
Deinococcus geothermalis (strain DSM 11300)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity.SAAS annotation

Catalytic activityi

2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH.SAAS annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

AntioxidantSAAS annotation, Oxidoreductase, PeroxidaseSAAS annotationImported

Enzyme and pathway databases

BioCyciDGEO319795:GHMU-1472-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alkyl hydroperoxide reductase AhpDSAAS annotation (EC:1.11.1.15SAAS annotation)
Gene namesi
Ordered Locus Names:Dgeo_1446Imported
OrganismiDeinococcus geothermalis (strain DSM 11300)Imported
Taxonomic identifieri319795 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002431 Componenti: Chromosome

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi319795.Dgeo_1446.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OYOX-ray1.51A/B1-195[»]
ProteinModelPortaliQ1IYE3.
SMRiQ1IYE3. Positions 10-195.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ1IYE3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini54 – 13582CMDInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the AhpD family.SAAS annotation

Keywords - Domaini

Redox-active centerSAAS annotation

Phylogenomic databases

eggNOGiENOG4107Q8N. Bacteria.
COG2128. LUCA.
HOGENOMiHOG000219400.
OMAiNMSNRVA.
OrthoDBiPOG091H0YNQ.

Family and domain databases

Gene3Di1.20.1290.10. 1 hit.
InterProiIPR029032. AhpD-like.
IPR004675. AhpD_core.
IPR003779. CMD-like.
IPR010195. Uncharacterised_peroxidase-rel.
[Graphical view]
PfamiPF02627. CMD. 1 hit.
[Graphical view]
SUPFAMiSSF69118. SSF69118. 1 hit.
TIGRFAMsiTIGR00778. ahpD_dom. 1 hit.
TIGR01926. peroxid_rel. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1IYE3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTTQPEAKD RISSLPVPDA TQVPEGVRKL WAKAEANIGF VPNVFRAQAV
60 70 80 90 100
NGEQFLAWWN YFNLLLNKEG YLTNAERELV AVVVSGVNRC LYCAVSHGAA
110 120 130 140 150
LREFLGDPQK ADAVAVNWRH ADLTEREQAL AAYAEKLTRH PAEVTAADLE
160 170 180 190
PLRAVGLDDH QIMELVQVIG MFNLTNRVSS ALGFVPNPEY YRQAR
Length:195
Mass (Da):21,692
Last modified:June 13, 2006 - v1
Checksum:iDEC35D0535D1C73D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000359 Genomic DNA. Translation: ABF45741.1.
RefSeqiWP_011530575.1. NC_008025.1.

Genome annotation databases

EnsemblBacteriaiABF45741; ABF45741; Dgeo_1446.
KEGGidge:Dgeo_1446.
PATRICi21624805. VBIDeiGeo41128_2034.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000359 Genomic DNA. Translation: ABF45741.1.
RefSeqiWP_011530575.1. NC_008025.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OYOX-ray1.51A/B1-195[»]
ProteinModelPortaliQ1IYE3.
SMRiQ1IYE3. Positions 10-195.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi319795.Dgeo_1446.

Protocols and materials databases

DNASUi4058826.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF45741; ABF45741; Dgeo_1446.
KEGGidge:Dgeo_1446.
PATRICi21624805. VBIDeiGeo41128_2034.

Phylogenomic databases

eggNOGiENOG4107Q8N. Bacteria.
COG2128. LUCA.
HOGENOMiHOG000219400.
OMAiNMSNRVA.
OrthoDBiPOG091H0YNQ.

Enzyme and pathway databases

BioCyciDGEO319795:GHMU-1472-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ1IYE3.

Family and domain databases

Gene3Di1.20.1290.10. 1 hit.
InterProiIPR029032. AhpD-like.
IPR004675. AhpD_core.
IPR003779. CMD-like.
IPR010195. Uncharacterised_peroxidase-rel.
[Graphical view]
PfamiPF02627. CMD. 1 hit.
[Graphical view]
SUPFAMiSSF69118. SSF69118. 1 hit.
TIGRFAMsiTIGR00778. ahpD_dom. 1 hit.
TIGR01926. peroxid_rel. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ1IYE3_DEIGD
AccessioniPrimary (citable) accession number: Q1IYE3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.