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Protein

Kynurenine formamidase

Gene

kynB

Organism
Deinococcus geothermalis (strain DSM 11300)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine, the second step in the kynurenine pathway of tryptophan degradation.UniRule annotation

Catalytic activityi

N-formyl-L-kynurenine + H2O = formate + L-kynurenine.UniRule annotation

Pathwayi: L-tryptophan degradation via kynurenine pathway

This protein is involved in step 2 of the subpathway that synthesizes L-kynurenine from L-tryptophan.UniRule annotation
Proteins known to be involved in the 2 steps of the subpathway in this organism are:
  1. Tryptophan 2,3-dioxygenase (kynA)
  2. Kynurenine formamidase (kynB)
This subpathway is part of the pathway L-tryptophan degradation via kynurenine pathway, which is itself part of Amino-acid degradation.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes L-kynurenine from L-tryptophan, the pathway L-tryptophan degradation via kynurenine pathway and in Amino-acid degradation.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase
Biological processTryptophan catabolism

Enzyme and pathway databases

UniPathwayiUPA00333; UER00454

Names & Taxonomyi

Protein namesi
Recommended name:
Kynurenine formamidaseUniRule annotation (EC:3.5.1.9UniRule annotation)
Short name:
KFAUniRule annotation
Short name:
KFaseUniRule annotation
Alternative name(s):
ArylformamidaseUniRule annotation
N-formylkynurenine formamidaseUniRule annotation
Short name:
FKFUniRule annotation
Gene namesi
Name:kynBUniRule annotation
Ordered Locus Names:Dgeo_1533
OrganismiDeinococcus geothermalis (strain DSM 11300)
Taxonomic identifieri319795 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002431 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003621211 – 213Kynurenine formamidaseAdd BLAST213

Proteomic databases

PRIDEiQ1IY56

Interactioni

Protein-protein interaction databases

STRINGi319795.Dgeo_1533

Structurei

3D structure databases

ProteinModelPortaliQ1IY56
SMRiQ1IY56
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cyclase 1 superfamily. KynB family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107VWA Bacteria
COG1878 LUCA
HOGENOMiHOG000219455
KOiK07130
OMAiCPVNVGR
OrthoDBiPOG091H0N8N

Family and domain databases

Gene3Di3.50.30.50, 1 hit
HAMAPiMF_01969 KynB, 1 hit
InterProiView protein in InterPro
IPR007325 KFase
IPR037175 KFase_sf
IPR017484 Kynurenine_formamidase_bac
PfamiView protein in Pfam
PF04199 Cyclase, 1 hit
SUPFAMiSSF102198 SSF102198, 1 hit

Sequencei

Sequence statusi: Complete.

Q1IY56-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDISRQLTP SHPNWPGDAP FRVKPGARIA QGDSVNTGEL CTSTHTGTHV
60 70 80 90 100
DAPWHYSETG ARLEEVELNR YVGRCRVVTV RAEGGLIPAA ALAGLPKRLP
110 120 130 140 150
PRLLLHTGQP AHWTEFPEDF AALDPALIRE AARRGVRLIG TDSPSVDPLT
160 170 180 190 200
SKTLDAHHAC LETDTLILEG LNLAEVPDGE YDLVCLPLPL AEVDGAPARA
210
ILLPAGTLPE GEG
Length:213
Mass (Da):22,785
Last modified:June 13, 2006 - v1
Checksum:iF06679FFA4C5838C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000359 Genomic DNA Translation: ABF45828.1
RefSeqiWP_011530662.1, NC_008025.1

Genome annotation databases

EnsemblBacteriaiABF45828; ABF45828; Dgeo_1533
KEGGidge:Dgeo_1533

Similar proteinsi

Entry informationi

Entry nameiKYNB_DEIGD
AccessioniPrimary (citable) accession number: Q1IY56
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: June 13, 2006
Last modified: April 25, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

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