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Q1IX70

- EFTU_DEIGD

UniProt

Q1IX70 - EFTU_DEIGD

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Protein

Elongation factor Tu

Gene

tuf1

more
Organism
Deinococcus geothermalis (strain DSM 11300)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi82 – 865GTPUniRule annotation
Nucleotide bindingi137 – 1404GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factor

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciDGEO319795:GHMU-1904-MONOMER.
DGEO319795:GHMU-664-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tuf1UniRule annotation
Ordered Locus Names:Dgeo_0646
AND
Name:tuf2UniRule annotation
Ordered Locus Names:Dgeo_1869
OrganismiDeinococcus geothermalis (strain DSM 11300)
Taxonomic identifieri319795 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
ProteomesiUP000002431: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 405405Elongation factor TuPRO_0000337370Add
BLAST

Proteomic databases

PRIDEiQ1IX70.

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi319795.Dgeo_1869.

Structurei

3D structure databases

ProteinModelPortaliQ1IX70.
SMRiQ1IX70. Positions 10-405.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini10 – 215206tr-type GAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni19 – 268G1By similarity
Regioni61 – 655G2By similarity
Regioni82 – 854G3By similarity
Regioni137 – 1404G4By similarity
Regioni175 – 1773G5By similarity

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0050.
HOGENOMiHOG000229290.
KOiK02358.
OMAiGTEMCMP.
OrthoDBiEOG6R5C6X.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1IX70-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAKGTFERTK PHVNVGTIGH VDHGKTTLTA AITFTAAAMD PTVEKLAYDQ
60 70 80 90 100
IDKAPEEKAR GITINTAHVE YNTPARHYSH VDCPGHADYV KNMITGAAQM
110 120 130 140 150
DGAILVVSSA DGPMPQTREH ILLARQVGVP YIVVFMNKVD MVDDEELLEL
160 170 180 190 200
VEMEVRELLS KYEFPGDDLP VIKGSALQAL EALQQNPKTA RGENPWVDKI
210 220 230 240 250
WELLDAIDAY IPTPERATDK TFLMPVEDVF TITGRGTVAT GRVERGVCKV
260 270 280 290 300
GDEVEIVGLR DTKKTTITGV EMHRKLLDQG MAGDNVGVLL RGVARDDVER
310 320 330 340 350
GQVLAKPGSI TPHTKFEASV YVLSKDEGGR HSAFFGGYRP QFYFRTTDVT
360 370 380 390 400
GVVELPAGVE MVMPGDNVSF TVELIKPIAM EEGLRFAIRE GGRTVGAGVV

TKVLE
Length:405
Mass (Da):44,215
Last modified:June 13, 2006 - v1
Checksum:iC9F815B644937456
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000359 Genomic DNA. Translation: ABF44948.1.
CP000359 Genomic DNA. Translation: ABF46164.1.
RefSeqiYP_604117.1. NC_008025.1.
YP_605333.1. NC_008025.1.

Genome annotation databases

EnsemblBacteriaiABF44948; ABF44948; Dgeo_0646.
ABF46164; ABF46164; Dgeo_1869.
GeneIDi4057611.
4058995.
KEGGidge:Dgeo_0646.
dge:Dgeo_1869.
PATRICi21623143. VBIDeiGeo41128_1212.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000359 Genomic DNA. Translation: ABF44948.1 .
CP000359 Genomic DNA. Translation: ABF46164.1 .
RefSeqi YP_604117.1. NC_008025.1.
YP_605333.1. NC_008025.1.

3D structure databases

ProteinModelPortali Q1IX70.
SMRi Q1IX70. Positions 10-405.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 319795.Dgeo_1869.

Proteomic databases

PRIDEi Q1IX70.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABF44948 ; ABF44948 ; Dgeo_0646 .
ABF46164 ; ABF46164 ; Dgeo_1869 .
GeneIDi 4057611.
4058995.
KEGGi dge:Dgeo_0646.
dge:Dgeo_1869.
PATRICi 21623143. VBIDeiGeo41128_1212.

Phylogenomic databases

eggNOGi COG0050.
HOGENOMi HOG000229290.
KOi K02358.
OMAi GTEMCMP.
OrthoDBi EOG6R5C6X.

Enzyme and pathway databases

BioCyci DGEO319795:GHMU-1904-MONOMER.
DGEO319795:GHMU-664-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 11300.

Entry informationi

Entry nameiEFTU_DEIGD
AccessioniPrimary (citable) accession number: Q1IX70
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: June 13, 2006
Last modified: November 26, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3