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Q1IWV2 (GLGA_DEIGD) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Dgeo_1988
OrganismDeinococcus geothermalis (strain DSM 11300) [Complete proteome] [HAMAP]
Taxonomic identifier319795 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus

Protein attributes

Sequence length447 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 447447Glycogen synthase HAMAP-Rule MF_00484
PRO_1000014349

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q1IWV2 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: BD08E56A544091C6

FASTA44748,612
        10         20         30         40         50         60 
MRVVHVASEV FPFSRSGGLG DVLAALPAEQ ARLGANVTVV SPWYATLSGT PQEVWRGEVP 

        70         80         90        100        110        120 
GLGPVGVGEL RASGVRFLFV SLPAFERPGL YHPDDVERFC AFGRAVLPVL QALGAVPDVL 

       130        140        150        160        170        180 
HGHDWQAGLV VAHAHLAGWR TAFTIHNLQY QGRWNLAEAR TWTGLPDWTF SPEGVEFYGD 

       190        200        210        220        230        240 
LNLMKAGLVF AEQVTTVSPT YAREITTPQY GEGLEGVLIR LALEGRLSGI LNGLDQDRWN 

       250        260        270        280        290        300 
PRTDPDIRPY ADPAGKAANG SVLRAEFGLD DAPILGVVSR LANQKGIDLL IEALPELVER 

       310        320        330        340        350        360 
WNVVVLGGGD PLLTAALHGW AYHPRVAFVS GLNEALAHRI YAGADAFAMP SRFEPCGLSQ 

       370        380        390        400        410        420 
MIALRYGTLP IVRETGGLVD TVPGDVGFRF ADATTEALAT ACRDARTTLE DVVEWQSRMK 

       430        440 
RGMELDFSWE GSARHYLALY RHLCSVN 

« Hide

References

[1]"Complete sequence of chromosome 1 of Deinococcus geothermalis DSM 11300."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Daly M.J., Fredrickson J.K., Makarova K.S., Gaidamakova E.K., Zhai M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11300.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000359 Genomic DNA. Translation: ABF46282.1.
RefSeqYP_605451.1. NC_008025.1.

3D structure databases

ProteinModelPortalQ1IWV2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING319795.Dgeo_1988.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF46282; ABF46282; Dgeo_1988.
GeneID4058451.
KEGGdge:Dgeo_1988.
PATRIC21625943. VBIDeiGeo41128_2586.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK444617.

Enzyme and pathway databases

BioCycDGEO319795:GHMU-2032-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_DEIGD
AccessionPrimary (citable) accession number: Q1IWV2
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: June 13, 2006
Last modified: February 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways