Reviewed, UniProtKB/Swiss-Prot Q1IWV2 (GLGA_DEIGD)

Names and origin

Protein names

Recommended name:
    Glycogen synthase
    EC=2.4.1.21
Alternative name(s):
    Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	Dgeo_1988

Organism

Deinococcus geothermalis (strain DSM 11300) [Complete proteome] [HAMAP]

Taxonomic identifier

319795 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	447 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 447	447	Glycogen synthase HAMAP MF_00484		PRO_1000014349
Sites
	Binding site	15	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q1IWV2-1 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: BD08E56A544091C6	FASTA	447	48,612
	10 20 30 40 50 60 MRVVHVASEV FPFSRSGGLG DVLAALPAEQ ARLGANVTVV SPWYATLSGT PQEVWRGEVP 70 80 90 100 110 120 GLGPVGVGEL RASGVRFLFV SLPAFERPGL YHPDDVERFC AFGRAVLPVL QALGAVPDVL 130 140 150 160 170 180 HGHDWQAGLV VAHAHLAGWR TAFTIHNLQY QGRWNLAEAR TWTGLPDWTF SPEGVEFYGD 190 200 210 220 230 240 LNLMKAGLVF AEQVTTVSPT YAREITTPQY GEGLEGVLIR LALEGRLSGI LNGLDQDRWN 250 260 270 280 290 300 PRTDPDIRPY ADPAGKAANG SVLRAEFGLD DAPILGVVSR LANQKGIDLL IEALPELVER 310 320 330 340 350 360 WNVVVLGGGD PLLTAALHGW AYHPRVAFVS GLNEALAHRI YAGADAFAMP SRFEPCGLSQ 370 380 390 400 410 420 MIALRYGTLP IVRETGGLVD TVPGDVGFRF ADATTEALAT ACRDARTTLE DVVEWQSRMK 430 440 RGMELDFSWE GSARHYLALY RHLCSVN

References

[1]

"Complete sequence of chromosome 1 of Deinococcus geothermalis DSM 11300." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Daly M.J., Fredrickson J.K., Makarova K.S., Gaidamakova E.K., Zhai M., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000359 Genomic DNA. Translation: ABF46282.1.
RefSeq	YP_605451.1.
3D structure databases
SMR	Q1IWV2. Positions 1-445.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IWV2.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Genome annotation databases
GeneID	4058451.
GenomeReviews	Gene locus Dgeo_1988 in contig CP000359_GR.
KEGG	dge:Dgeo_1988.
NMPDR	fig|68909.1.peg.2173.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0297.
HOGENOM	HBG596384.
OMA	LPGYPAV.
PhylomeDB	Q1IWV2.
Enzyme and pathway databases
BioCyc	DGEO319795:DGEO_1988-MONOMER.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR011835. GlgA. IPR001296. Glyco_trans_1. IPR013534. Starch_synth_cat_dom. [Graphical view]
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. glgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_DEIGD

Accession

Primary (citable) accession number: Q1IWV2

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	June 13, 2006
Last modified:	February 9, 2010
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)