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Q1IVB0 (Q1IVB0_KORVE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Diguanylate cyclase with GAF sensor EMBL ABF39190.1
Gene names
Ordered Locus Names:Acid345_0185
OrganismKoribacter versatilis (strain Ellin345)
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length1125 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ABF39190.1
Chain26 – 11251100 Potential EMBL ABF39190.1
PRO_5000120816

Sequences

Sequence LengthMass (Da)Tools
Q1IVB0 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 1EA749ABED1B4752

FASTA1,125125,337
        10         20         30         40         50         60 
MEPLLAGTVF VPGLVALAFL LVFAYLQRQS SERYFHSWQW FWFANTAYYA LVAVADTHPK 

        70         80         90        100        110        120 
IPAYASLAHT AEICGAVALF VSARSFAKTE PPAWTKYLVL CALIYWTALH AIPPLRVMVR 

       130        140        150        160        170        180 
PYLHAWIAVL VVLLLATMEY ARVAYQRDSA GLRWMTASTA LWIVMQAGKE IPPSLLVGRY 

       190        200        210        220        230        240 
LHRGSEYLEI MPLLLLGTAM VVVLFDDERR AIQENALAFS SLDIDPTTPV TREQIQPSIE 

       250        260        270        280        290        300 
SLLTRFMSLL RLEQAVLYVS EPWRGSVPSV ARGFSPDFIT RLEVQNAGDY LADIAFRRGG 

       310        320        330        340        350        360 
ILSIHSLKEL QGPMRSAAHP GLTSLVNTLK EENISRFSAV CLQTRERNMG VVIFPHGKRH 

       370        380        390        400        410        420 
AFSASRLRLL LSVSMQMGMT LENYLLVHDA HRRTKEFELL TQIGQVISSR LDPDEVLAAV 

       430        440        450        460        470        480 
HRELGRLFDT SNFYVAFLEG LELRYEFETV GAIRQPRRSR RSKNGLSDFV IRTGQPILIR 

       490        500        510        520        530        540 
SDMKRVSQRL GIEPSSHPAK CFIGVPIRIG AVSVGVVAAL NFDREFVYEQ RDVEVLATAA 

       550        560        570        580        590        600 
GQVAVAIENA RMFAHEQRRA RYLSFLNNVS QTAISSQNAE EMLSEIVGQI QKNFNYDHIG 

       610        620        630        640        650        660 
IGILDYATKE IEIKAEAGTT AHAKGKRVAL GVGVLGRVAR TGDTSLVQDT AATHLAGILP 

       670        680        690        700        710        720 
DSRSALCIPI TYAEQLLGVL NIESRRENAF TEEDTLLLRT LADLLATALH NAFVFQKMQQ 

       730        740        750        760        770        780 
QSITDALTGS KTRRYFLEAL QSEWKRASRS TRPFSVVMID LDKFKQVNDT MGHLEGDLVL 

       790        800        810        820        830        840 
ARIARLLEQK CRQSNVVARF GGDEFVILMP ETGVDQAQIL AERLRLWIAT DPMLSEHQIT 

       850        860        870        880        890        900 
GSFGVATYPI HGSSVEDIMR VADAGMYVSK HAGGNKVATA DEFIDGQNTS VQRQLISAYV 

       910        920        930        940        950        960 
EGFLQREHYG PEYTSELVSA LKKFSENEAE GKREVMMDAI LALNRASESR ELFASGHGEQ 

       970        980        990       1000       1010       1020 
VARTAEIIAR ELGIGGQDIQ DLIFAARIHD VGKIVVPEKI LNKPAMLTED EHYLVAMHAN 

      1030       1040       1050       1060       1070       1080 
VGAEIIDAIP DAQHIRQMVR HHHEAFDGSG YPDGLKGEQI PLYARIISVA EAYVSMMVDR 

      1090       1100       1110       1120 
SYRAARSQAD AVRELESRSG SQFDGMLVRI LIRQFKAERA AQGND

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000360 Genomic DNA. Translation: ABF39190.1.
RefSeqYP_589264.1. NC_008009.1.

3D structure databases

ProteinModelPortalQ1IVB0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1IVB0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4073072.
GenomeReviewsGene locus Acid345_0185 in contig CP000360_GR.
KEGGaba:Acid345_0185.
NMPDRfig|204669.6.peg.184.
PATRIC31977076. VBICanKor57425_0195.

Phylogenomic databases

eggNOGCOG2199.

Family and domain databases

InterProIPR001054. A/G_cyclase.
IPR000160. Diguanylate_cyclase-pred.
IPR003018. GAF.
IPR023279. HD.
IPR003607. Metal-dep_PHydrolase_HD_dom.
IPR006674. Metal-dep_PHydrolase_HD_sub.
[Graphical view]
Gene3DG3DSA:1.10.3210.10. HD. 1 hit.
PfamPF01590. GAF. 2 hits.
PF00990. GGDEF. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 3 hits.
SM00267. GGDEF. 1 hit.
SM00471. HDc. 1 hit.
[Graphical view]
SUPFAMSSF55073. A/G_cyclase. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
PROSITEPS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1IVB0_KORVE
AccessionPrimary (citable) accession number: Q1IVB0
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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