Unreviewed, UniProtKB/TrEMBL Q1IV91 (Q1IV91_ACIBL)

Names and origin

Protein names

Submitted name:
    Diguanylate cyclase EMBL ABF39209.1

Gene names

Ordered Locus Names:

Acid345_0204

Organism

Acidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	453 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

Ontologies

Keywords
Domain	Signal EMBL ABF39209.1
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	Potential EMBL ABF39209.1
	Chain	33 – 453	421	Potential EMBL ABF39209.1		PRO_5000120824

Sequences

	Sequence		Length	Mass (Da)
	Q1IV91-1 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: BEE2A33B096033D0	FASTA	453	49,240
	10 20 30 40 50 60 MDTIAVTYVH WLVAASIATS VVASYAAFSF AERVAASDRQ RSLGWLIAGA FAMGLGIWSM 70 80 90 100 110 120 HYLGMLAVQL PVPVVYHVPT VIISLLLAVA ASAAVLWVVS RESLSGRAIV LGSVAMGGGI 130 140 150 160 170 180 GAMHYTGMAA MRSYAMHRYN PSLVLLSLVI AVAFSWMALR ITFLLRREPG AHELRRMGGA 190 200 210 220 230 240 VLMGIGIASM HYTAMFAVTF ERGNTEFSTV HTVPVTHIDQ LGIVVMAGMV LFGALISAYF 250 260 270 280 290 300 DRQMSRDLRV SNERLAEMQV ALLQREKELK EAVAKLEELS TRDGLTGLYN RRFFDTTLTA 310 320 330 340 350 360 ECKRAARANY PISLLIIDVD CFKALNDHYG HLVGDDCLQK VGKSLASAVR RTSDVVARYG 370 380 390 400 410 420 GEEFALILPN TSEESATTIG ENIRRAVLGL EIANANSTAG PFVTLSVGVC TRRPSHPRSS 430 440 450 EDILVTTNEI IRAADEALYR AKREGRNRVL LGA

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000360 Genomic DNA. Translation: ABF39209.1.
RefSeq	YP_589283.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IV91.
Genome annotation databases
GeneID	4069673.
GenomeReviews	Gene locus Acid345_0204 in contig CP000360_GR.
KEGG	aba:Acid345_0204.
NMPDR	fig|204669.6.peg.202.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q1IV91.
OMA	LEIANAN
PhylomeDB	Q1IV91.
Family and domain databases
InterPro	IPR000160. Diguanylate_cyclase-pred. IPR005330. MHYT. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF03707. MHYT. 3 hits. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. [Graphical view]
TIGRFAMs	TIGR00254. GGDEF. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. PS50924. MHYT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IV91_ACIBL

Accession

Primary (citable) accession number: Q1IV91

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	November 24, 2009
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)