Q1IUU8 (Q1IUU8_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate phosphodiesterase EMBL ABF39352.1

Gene names

Ordered Locus Names:

Acid345_0347

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	400 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q1IUU8 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: DDB9D478215AD9FB	FASTA	400	44,213
	10 20 30 40 50 60 MLRYIARQAI LDTRQQTFGY ELLYRAAAEN FARIGDPDEA ARRTLDDLLT LGVKELSRGK 70 80 90 100 110 120 QLFLNCTHEL LAQGFVKLLP TQNLVLEILE TVVPDHDLLQ SCAELKAAGY SLALDDFIPG 130 140 150 160 170 180 PNTLPLVEFA DYIKLDFRAM PLEECGALVQ QFGKKIEFLA EKVETLEEFT AASDMGCSLF 190 200 210 220 230 240 QGFFFAQPAL LTMRQIPPMY VNYIRLLDAT CKPDFNFAEI EAIIKTDVAL SYKLLRFLNS 250 260 270 280 290 300 AAFCIRSTIT SLRQALIILG ENAIRRWVAV SAAANAATGK PPELLISALL RARFCELLAV 310 320 330 340 350 360 GAHSNPYWAF TVGLFSMLSP LLDTPLETIL ASVQLPDEVR AALLGESGQL RTLFELVCGY 370 380 390 400 IEGDWIAITP KCLALGLAQK QVTSCYLEAV RSVDALMALA

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF39352.1.
RefSeq	YP_589426.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IUU8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IUU8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4069589.
GenomeReviews	Gene locus Acid345_0347 in contig CP000360_GR.
KEGG	aba:Acid345_0347.
NMPDR	fig|204669.6.peg.341.
PATRIC	31977438. VBICanKor57425_0373.
Phylogenomic databases
eggNOG	COG3434.
HOGENOM	HBG537479.
OMA	RQPIFNR.
Family and domain databases
InterPro	IPR014408. dGMP_Pdiesterase_EAL/HD-GYP. IPR001633. Diguanylate_PEstase_EAL_dom. IPR013976. HDOD. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit. G3DSA:1.10.3150.10. HDOD. 1 hit.
KO	K07181.
Pfam	PF00563. EAL. 1 hit. PF08668. HDOD. 1 hit. [Graphical view]
PIRSF	PIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMART	SM00052. EAL. 1 hit. [Graphical view]
SUPFAM	SSF141868. SSF141868. 1 hit.
PROSITE	PS50883. EAL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IUU8_KORVE

Accession

Primary (citable) accession number: Q1IUU8

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)