Q1IU82 (RS2_KORVE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S2

Gene names

Name:	rpsB
Ordered Locus Names:	Acid345_0563

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	301 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 301	301	30S ribosomal protein S2 HAMAP MF_00291_B		PRO_1000003876

Sequences

	Sequence		Length	Mass (Da)
	Q1IU82 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 90F4894DF1B60666	FASTA	301	33,612
	10 20 30 40 50 60 MANITMKELL EAGVHFGHQT KRWNPKMKEY IFGERNGIYI IDLQKTLKMF KEASKFVSDV 70 80 90 100 110 120 AAEGKLVLFV GTKRQAQDAI AEEAKRCGMF YINQRWLGGL LTNWVTVQKS VKRLKELDEM 130 140 150 160 170 180 ATDGRYELLP KKEVIKLERE RKHLQANLAG IKNLNRLPDC LFVIDSNKEQ IAVKEARKLG 190 200 210 220 230 240 IPVVAVVDTN CDPSEVDYVI PGNDDALRAI RLFASKIADS VAEGSQLADK SMIESTNVSN 250 260 270 280 290 300 AAEVIPQSYI GDDEEHGLAQ PTEEAAPVEE EINMEEVLGK GVRKQPVSEN ENVEAAAAEQ K

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF39568.1.
RefSeq	YP_589642.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IU82.
SMR	Q1IU82. Positions 6-227.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IU82.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4073052.
GenomeReviews	Gene locus Acid345_0563 in contig CP000360_GR.
KEGG	aba:Acid345_0563.
NMPDR	fig|204669.6.peg.553.
PATRIC	31977894. VBICanKor57425_0599.
Phylogenomic databases
eggNOG	COG0052.
HOGENOM	HBG736296.
OMA	KQAQDSV.
PhylomeDB	Q1IU82.
ProtClustDB	PRK05299.
Enzyme and pathway databases
BioCyc	ABAC204669:ACID345_0563-MONOMER.
Family and domain databases
HAMAP	MF_00291_B. Ribosomal_S2_B. [Tree]
InterPro	IPR001865. Ribosomal_S2. IPR005706. Ribosomal_S2_bac/mit/plastid. IPR018130. Ribosomal_S2_CS. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02967.
PANTHER	PTHR12534. Ribosom_S2_bac. 1 hit.
Pfam	PF00318. Ribosomal_S2. 1 hit. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01011. RpsB_bact. 1 hit.
PROSITE	PS00962. RIBOSOMAL_S2_1. 1 hit. PS00963. RIBOSOMAL_S2_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS2_KORVE

Accession

Primary (citable) accession number: Q1IU82

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	June 13, 2006
Last modified:	January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program