Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q1ITL6 (Q1ITL6_KORVE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Acid345_0779 EMBL ABF39784.1
OrganismKoribacter versatilis (strain Ellin345) [Reference proteome] [HAMAP] EMBL ABF39784.1
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteriaAcidobacteriaCandidatus Koribacter

Protein attributes

Sequence length608 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABF39784.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1ITL6 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 698C938655ECC5ED

FASTA60867,631
        10         20         30         40         50         60 
MALEEYKKKR RFTDTPEPPP SIDKSKGHRF VVQKHHASRL HYDFRLEMDG VLKSWAVPKG 

        70         80         90        100        110        120 
PSLDPADKRL AMAVEDHPVS YLKFEGIIPE NNYGAGTVMV WDIGTWEPVG DADAMLAKGD 

       130        140        150        160        170        180 
LKFRLKGKKL NGEFALVHIK SRRSGTKGNE WLLIKHRDDA VVPGYDIDEY DFSALTKRSL 

       190        200        210        220        230        240 
DDIAGDQKSA EWQSNRAGSS NIPQKSAWLA DAIKKADKKA AAKKTAVKTK APAKKSAKTA 

       250        260        270        280        290        300 
AKKAVKTTAT KKQKDAHPAF ADLKGARHAA MPSQIQPMLA TLVDEPFEDS QWLYEIKWDG 

       310        320        330        340        350        360 
YRAVTFLNDG KLRFVSRNGN DLTNAYPELH DIGGSISAQR AILDGEIVAL DGEGRSSFSL 

       370        380        390        400        410        420 
MQQRTGIGEG GRRTGKGNAN IPVQYYAFDL LYLDGYDLTH VSLEDRKRVL SEIISPSDVL 

       430        440        450        460        470        480 
RVSDSFDEGL PLYEAARARG LEGIIAKRRE SCYLTKRSRE WLKIKITQRQ ECVIGGYTEP 

       490        500        510        520        530        540 
KGSRENFGSV VLGLYDDKGR LIPVGQAGSG FTAQSNAALW KKLQKLETKT SPFFGKPDSP 

       550        560        570        580        590        600 
RQVHYVRPEL VAEIKFTEWT HQGQSGQVRM RAPVFEGLRT DKSPSECVFD FAKPTKLEVK 


KAESGDAA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000360 Genomic DNA. Translation: ABF39784.1.
RefSeqYP_589858.1. NC_008009.1.

3D structure databases

ProteinModelPortalQ1ITL6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING204669.Acid345_0779.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF39784; ABF39784; Acid345_0779.
GeneID4069524.
KEGGaba:Acid345_0779.
PATRIC31978374. VBICanKor57425_0838.

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMAMVHRMDP.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycKVER204669:GHL8-786-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1ITL6_KORVE
AccessionPrimary (citable) accession number: Q1ITL6
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)