PAS/PAC sensor hybrid histidine kinase precursor - Koribacter versatilis (strain Ellin345)

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Q1IT62 (Q1IT62_KORVE) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 47. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
PAS/PAC sensor hybrid histidine kinase EMBL ABF39938.1
EC=2.7.13.3 EMBL ABF39938.1

Gene names

Ordered Locus Names:

Acid345_0935

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	828 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. SAAS SAAS013767

Ontologies

Keywords
Biological process	Two-component regulatory system SAAS SAAS005467
Domain	Signal EMBL ABF39938.1
Ligand	ATP-binding SAAS SAAS013767 Nucleotide-binding
Molecular function	Kinase SAAS SAAS013767 EMBL ABF39938.1 Transferase
PTM	Phosphoprotein SAAS SAAS005467
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	peptidyl-histidine phosphorylation Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW two-component response regulator activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Signal peptide

1 – 23

Potential EMBL ABF39938.1

Chain

24 – 828

805

Potential EMBL ABF39938.1

PRO_5000121057

Sequences

Sequence

Length

Mass (Da)

Tools

Q1IT62 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: C9164FB3EAB8584E
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FASTA

828

91,315

        10         20         30         40         50         60 
MSRFRKLAWA ASAIVIAHLI WLAVWPNARW GFLASQQFQF LAGVLAGIAC WRASERSQQY 

        70         80         90        100        110        120 
PRMFWQFSAV TFGFWSIASL IDSSYDLLGN GLIDPPLWVA LVIFLSTAPM FIAALMGGGK 

       130        140        150        160        170        180 
SEERVHWDVI LDVAQLLILI VAVHIMLVAI PSMTQSVERG AVHRLILLAA WRGALALALT 

       190        200        210        220        230        240 
MRAAFSKSLA IRRLLAPVAA AMSLFAVASS VGNFADRFQI WNEVRWFDLA WTIPFALVAV 

       250        260        270        280        290        300 
AASLWRERGR VGVQSELTAD SAPVFIIYLP ALAIPVILLS LYSTIVFEQV VVGLTAMFVS 

       310        320        330        340        350        360 
VAFFTMRVLV AQRRQDQMLQ QLANSERRYR RLFEDNMAAV YRSTPDGQIT DCNQAFCDMF 

       370        380        390        400        410        420 
GYTKEEIANG SAARLYAGGK VEREATLRDL RTHGQQRSVQ VAYRRKDGSL IHTLGHRAMV 

       430        440        450        460        470        480 
VDRDGMEMIE GTLIDMTQRR SLELQLQQSQ KMESLGTMAG GVAHDFNNLL TVIGGYSAMQ 

       490        500        510        520        530        540 
MANLDANDPN HEYATEIKAA SDRAAGLTRQ LLAFSRQQVM EERPVILNSL IRDFEKFLRR 

       550        560        570        580        590        600 
LVGEDVQLRT SFDLELGTVR TDPGQMEQVL MNLTSNARDA MPLGGTIRIE TANVVLNERS 

       610        620        630        640        650        660 
LERNPIVVPG GYARLSVSDD GIGMEEATIA HIFEPFFTTK AVGKGTGLGL ATTYGIVKQS 

       670        680        690        700        710        720 
RGYIEVQSSP GAGSRFDVYL PLIGRDGAGK SGDTRTAVAR GTETILLVED DVQLRSMSVT 

       730        740        750        760        770        780 
LLQSCGYNVL TADDPREIEK LCERHGERID LLLTDVVMPH LSGSEVAKRV AAKVPAIKIL 

       790        800        810        820 
FMSGYPTHSK LDRTALEASG SFLQKPFAPA VLAAKVREVL DQELTGQA

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References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils."
Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M.

Kuske C.R.
Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF39938.1.
RefSeq	YP_590012.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IT62.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IT62.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4070587.
GenomeReviews	Gene locus Acid345_0935 in contig CP000360_GR.
KEGG	aba:Acid345_0935.
NMPDR	fig\|204669.6.peg.921.
PATRIC	31978694. VBICanKor57425_0995.
Phylogenomic databases
eggNOG	COG0642.
OMA	ANSERRY.
PhylomeDB	Q1IT62.
Family and domain databases
InterPro	IPR003594. ATPase-like_ATP-bd. IPR011006. CheY-like_superfamily. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013767. PAS_fold. IPR004358. Sig_transdc_His_kin-like_C. IPR003661. Sig_transdc_His_kin_sub1_dim/P. IPR005467. Sig_transdc_His_kinase_core. IPR009082. Sig_transdc_His_kinase_dimeric. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Gene3D	G3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
Pfam	PF02518. HATPase_c. 1 hit. PF00512. HisKA. 1 hit. PF00989. PAS. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
PRINTS	PR00344. BCTRLSENSOR.
SMART	SM00387. HATPase_c. 1 hit. SM00388. HisKA. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF55874. ATP_bd_ATPase. 1 hit. SSF52172. CheY_like. 1 hit. SSF47384. His_kin_homodim. 1 hit.
TIGRFAMs	TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50109. HIS_KIN. 1 hit. PS50113. PAC. 1 hit. PS50112. PAS. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IT62_KORVE

Accession

Primary (citable) accession number: Q1IT62

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information