Q1IT36 (Q1IT36_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase with PAS/PAC sensor EMBL ABF39964.1

Gene names

Ordered Locus Names:

Acid345_0961

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	465 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1IT36 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: B1B28F560A43DE9D	FASTA	465	50,782
	10 20 30 40 50 60 MPAVIPANEA ARQQELTSFQ ILDTPPDSSF DNLVALAAEI CEAPISTVTF IDSDRQWFKA 70 80 90 100 110 120 KLGVESDQTP REQSFCAHAI LKPNEFMVVP DAAKDPRFED NPLVTGEPNI RFYAAAPLVS 130 140 150 160 170 180 KGLGLGALCI IDRQPRTLKP FQESALRTLA SQAAQLMELH RQRAMAENHR RFLHTVMETL 190 200 210 220 230 240 AEGVIVRDSQ RRLLAHNTMA SVLLGTELKD MVGQTFSMLH FKPVQPDGFP IPTEDLPSYK 250 260 270 280 290 300 ALATGEPQRN VIFGITRPNK TEIWIESNAS VLNDPVHGEC AVISFRDVSD RKALEKQIQR 310 320 330 340 350 360 DGTTDPLTGL PNRAAFLNYV GKAIAAASRY KHPMSVCVAS LDDLKAMVAK HGPHAADSAL 370 380 390 400 410 420 KHFGTILRAT LRHEDSVARL AGDDFVALFP YVDANRALTS LDRFKSTLEN AQLRLHDGKE 430 440 450 460 ITLTGACGLS DWKPGMSAED LLDSALKACG EAKAKGRNSV AVAAG

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF39964.1.
RefSeq	YP_590038.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IT36.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IT36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4072949.
GenomeReviews	Gene locus Acid345_0961 in contig CP000360_GR.
KEGG	aba:Acid345_0961.
NMPDR	fig|204669.6.peg.947.
PATRIC	31978752. VBICanKor57425_1024.
Phylogenomic databases
eggNOG	COG2199.
OMA	GVGNRRH.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR003018. GAF. IPR001610. PAC. IPR000014. PAS. IPR013767. PAS_fold. [Graphical view]
Pfam	PF01590. GAF. 1 hit. PF00990. GGDEF. 1 hit. PF00989. PAS. 1 hit. [Graphical view]
SMART	SM00065. GAF. 1 hit. SM00267. GGDEF. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IT36_KORVE

Accession

Primary (citable) accession number: Q1IT36

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)