Q1IR40 (Q1IR40_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
PAS/PAC sensor signal transduction histidine kinase EMBL ABF40660.1
EC=2.7.13.3 EMBL ABF40660.1

Gene names

Ordered Locus Names:

Acid345_1659

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	384 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity	ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. SAAS SAAS000014
Sequence similarities	Contains 1 histidine kinase domain. SAAS SAAS009082

Ontologies

Keywords
Ligand	ATP-binding SAAS SAAS005467 Nucleotide-binding
Molecular function	Kinase SAAS SAAS004358 EMBL ABF40660.1 Transferase
PTM	Phosphoprotein SAAS SAAS005467
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	peptidyl-histidine phosphorylation Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1IR40 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 7F48C86564D6F96D	FASTA	384	42,511
	10 20 30 40 50 60 MEIERSIPRR EKAVWQENPE WLFESAPEAI FVFDDDLQYL EANPAACRLL RRNKEEIVGC 70 80 90 100 110 120 KIGTFSEDGA RLAEAIRKTP VGDGVEASHT LILPDGSVRT VEMVTRPNML PGIHLSFSRD 130 140 150 160 170 180 VTDRRLLERE LEHHTRLEAA GKLASGIAHD FNNMLTAILS YADLQLQHVE SGSAMQRYVL 190 200 210 220 230 240 GIQAAAERAA QTTHQLLAFC RRQKMQFAET QVNDVIQQSS ELIGRLIGED IELAFDLDRG 250 260 270 280 290 300 IPEVWADAGQ LNQVFVNLAV NARDAMPRGG RLLFATSKRG TEEKDKRVSI FVHDTGMGIG 310 320 330 340 350 360 ADVLPHIFEP FFTTKEQGKG TGLGLATVYG IVKQMKGEIL VSSEPGRGTT FEIALPASRA 370 380 AGAWVEPVTA KAKPNNMEHR PFAE

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF40660.1.
RefSeq	YP_590734.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IR40.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IR40.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4069807.
GenomeReviews	Gene locus Acid345_1659 in contig CP000360_GR.
KEGG	aba:Acid345_1659.
NMPDR	fig|204669.6.peg.1642.
PATRIC	31980242. VBICanKor57425_1766.
Phylogenomic databases
eggNOG	COG0642.
OMA	ERELEHH.
Family and domain databases
InterPro	IPR003594. ATPase-like_ATP-bd. IPR000014. PAS. IPR013656. PAS_4. IPR004358. Sig_transdc_His_kin-like_C. IPR003661. Sig_transdc_His_kin_sub1_dim/P. IPR005467. Sig_transdc_His_kinase_core. IPR009082. Sig_transdc_His_kinase_dimeric. [Graphical view]
Gene3D	G3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
Pfam	PF02518. HATPase_c. 1 hit. PF00512. HisKA. 1 hit. PF08448. PAS_4. 1 hit. [Graphical view]
PRINTS	PR00344. BCTRLSENSOR.
SMART	SM00387. HATPase_c. 1 hit. SM00388. HisKA. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
SUPFAM	SSF55874. ATP_bd_ATPase. 1 hit. SSF47384. His_kin_homodim. 1 hit.
TIGRFAMs	TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50109. HIS_KIN. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IR40_KORVE

Accession

Primary (citable) accession number: Q1IR40

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)