Unreviewed, UniProtKB/TrEMBL Q1IR27 (Q1IR27_ACIBL)

Names and origin

Protein names

Submitted name:
    Methyl-accepting chemotaxis sensory transducer EMBL ABF40673.1

Gene names

Ordered Locus Names:

Acid345_1672

Organism

Acidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	904 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

Ontologies

Keywords
Domain	Signal EMBL ABF40673.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	chemotaxis Inferred from electronic annotation. Source: InterPro signal transduction Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 33	33	Potential EMBL ABF40673.1
	Chain	34 – 904	871	Potential EMBL ABF40673.1		PRO_5000121225

Sequences

	Sequence		Length	Mass (Da)
	Q1IR27-1 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 82321AA6E72A28E2	FASTA	904	96,453
	10 20 30 40 50 60 MNWFYNLKLS SKLLLSFLLV AGIAAIIGYV GLSSTNRVNS GSHEMYANAF VPVRELAASR 70 80 90 100 110 120 GSFLDARIRS RSVLSVESRE ERRREYDSFK ADLQASNDHL SKYLATDLSP AEKPIATQLQ 130 140 150 160 170 180 ALLAEYLQTT APALDLAMDG KDHDAEKVLN GRTRAAAAEA VDAYQKLVDI NVEIGEKREK 190 200 210 220 230 240 ENSALAASAT QQIVGFMVFG VFAAIALGWF LTRLIVGPVR ELQATATKLA AGDVEVDIKA 250 260 270 280 290 300 NTNDELGKLA QSIAALAATI KDRAQAAQHI AQGDLQLQIK PASDKDVLAK SLQSLVDTLN 310 320 330 340 350 360 GLMQEMSTMS SAHDAGDIDA AINAAKFQGA YQMVASGINN MVAGHIVVKK KAMACLAEFG 370 380 390 400 410 420 RGNFEAPLER FPGKKAFIND TIEQVRANLK SLIADTNTLS DAAIQGRLGT RADATRHQGD 430 440 450 460 470 480 FRKIVQGVNY TLDTIVGKFD AIPKPIQFID SQFKVQYMNK AGLELMGKSA ESAIGSRCSY 490 500 510 520 530 540 NTSACGTEKC TCAQAMKIDG LTRIETQARI QGKQYDFTCC AVPLKDGNGR TIGAFELMDD 550 560 570 580 590 600 ESLIKTTMRK ADKVGDYRAR QAQKLSDALK ELAQGNLNAL MVTDASDADT DEARKTYEVI 610 620 630 640 650 660 SDAFAKSAAA FRGAMMDIGR TTEALLEAAT MLNNVSQQMT ASADETATQA NVVSAASEQV 670 680 690 700 710 720 SRNVQTVASG ADQMGASIKE IAKNTAEATR VANSAVQTAE ATNQNIGKLG QSSAEIGQVI 730 740 750 760 770 780 KVITSIAQQT NLLALNATIE AARAGEAGKG FAVVANEVKE LAKETAKATE DIGRKIEAIQ 790 800 810 820 830 840 TDTTGAVSAI AEIGAVINQI SDIQTTIASA VEEQSVTSNE ISRNLAEAAK GNVDITRNVT 850 860 870 880 890 900 GVAEAARVTT TGAAETQKSA KSLERMAVEL KKLVSRFKYD GEQNSRSLAV SSRADRMPAT SMIQ

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000360 Genomic DNA. Translation: ABF40673.1.
RefSeq	YP_590747.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IR27.
Genome annotation databases
GeneID	4069340.
GenomeReviews	Gene locus Acid345_1672 in contig CP000360_GR.
KEGG	aba:Acid345_1672.
NMPDR	fig|204669.6.peg.1655.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q1IR27.
OMA	PEADERC.
Family and domain databases
InterPro	IPR004090. Chemotax_Me-accpt_rcpt. IPR004089. Chemotax_Me-accpt_rcpt_sig. IPR003660. HAMP_linker_domain. IPR013656. PAS_4. [Graphical view]
Pfam	PF00672. HAMP. 1 hit. PF00015. MCPsignal. 1 hit. PF08448. PAS_4. 1 hit. [Graphical view]
PRINTS	PR00260. CHEMTRNSDUCR.
SMART	SM00304. HAMP. 2 hits. SM00283. MA. 1 hit. [Graphical view]
PROSITE	PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50885. HAMP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IR27_ACIBL

Accession

Primary (citable) accession number: Q1IR27

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	November 3, 2009
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)