Q1IQW6 (Q1IQW6_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Periplasmic sensor signal transduction histidine kinase EMBL ABF40734.1

Gene names

Ordered Locus Names:

Acid345_1733

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	594 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. SAAS SAAS003660
Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU003568.
Sequence similarities	Contains 1 histidine kinase domain. SAAS SAAS009082

Ontologies

Keywords
Biological process	Two-component regulatory system SAAS SAAS005467
Cellular component	Membrane
Domain	Signal EMBL ABF40734.1 Transmembrane SAAS SAAS005467 RuleBase RU003568
Ligand	ATP-binding SAAS SAAS005467 Nucleotide-binding
Molecular function	Kinase SAAS SAAS004358 RuleBase RU003568 EMBL ABF40734.1 Transferase
PTM	Phosphoprotein SAAS SAAS005467 RuleBase RU003568
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	peptidyl-histidine phosphorylation Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL ABF40734.1
	Chain	25 – 594	570	Potential EMBL ABF40734.1		PRO_5000121254

Sequences

	Sequence		Length	Mass (Da)
	Q1IQW6 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: BBC8E5C497BFCF55	FASTA	594	64,627
	10 20 30 40 50 60 MNLRQRLLLV FSLTVIIAVG AVGYIVSLRT REAFAQADQE RTSGLVAQFH REFDRRGADV 70 80 90 100 110 120 KARLGRMAAS DEVSRIAFDL GRGGDSSIYL SEAGTLAQQY GLDFLEMLGP DGSIISSAQW 130 140 150 160 170 180 QARFGYKETI PENSSTAFLK REELTNGSAV GLFAVKTLRA GDTTVYLVGG ERLDREFLQS 190 200 210 220 230 240 LATPVGTQAL LYRVGESGFQ SQNLIGLEGA VVAPEKYRPL LMLAMHDRKE VSAIVAPTAD 250 260 270 280 290 300 RKDSLYMTAI PLSDRSGQVV SVLMIGSPRR GLIELQDHIR AVALTVGGLG ILLAIAVSLW 310 320 330 340 350 360 ITGRVTRPIV ELANASRQVA AGELNVSVSP HGASGEVAEL AEAFNRMTSQ LLEQRERLVQ 370 380 390 400 410 420 SERVAAWREL ARRLAHELKN PLFPLQLTVE NMVKAREVMP EEFDEIFHES ATTLMAEIQN 430 440 450 460 470 480 LKGIIQRFSD FSKMPQPQLQ AVKVNEIVER VATLHAPALA NREHPVKMEM QLDAAVPVIA 490 500 510 520 530 540 ADPELLHRSL SNLVLNALDA MPQGGTITMR TAAREETVRI EVADTGTGLT KEECERLFTP 550 560 570 580 590 YYTTKQHGTG LGLAIVQSVI TDHGGTIGVE SAPGQGATFI IELPRRTAAS GTTA

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF40734.1.
RefSeq	YP_590808.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IQW6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IQW6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4072000.
GenomeReviews	Gene locus Acid345_1733 in contig CP000360_GR.
KEGG	aba:Acid345_1733.
NMPDR	fig|204669.6.peg.1717.
PATRIC	31980398. VBICanKor57425_1844.
Phylogenomic databases
eggNOG	COG5000.
HOGENOM	HBG309383.
OMA	NPLFPLQ.
PhylomeDB	Q1IQW6.
ProtClustDB	CLSK2777619.
Family and domain databases
InterPro	IPR003594. ATPase-like_ATP-bd. IPR003660. HAMP_linker_domain. IPR004358. Sig_transdc_His_kin-like_C. IPR003661. Sig_transdc_His_kin_sub1_dim/P. IPR005467. Sig_transdc_His_kinase_core. IPR009082. Sig_transdc_His_kinase_dimeric. [Graphical view]
Gene3D	G3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
Pfam	PF00672. HAMP. 1 hit. PF02518. HATPase_c. 1 hit. PF00512. HisKA. 1 hit. [Graphical view]
PRINTS	PR00344. BCTRLSENSOR.
SMART	SM00304. HAMP. 1 hit. SM00387. HATPase_c. 1 hit. SM00388. HisKA. 1 hit. [Graphical view]
SUPFAM	SSF55874. ATP_bd_ATPase. 1 hit. SSF47384. His_kin_homodim. 1 hit.
PROSITE	PS50885. HAMP. 1 hit. PS50109. HIS_KIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IQW6_KORVE

Accession

Primary (citable) accession number: Q1IQW6

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)