Q1IP12 (Q1IP12_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 16 EMBL ABF41388.1

Gene names

Ordered Locus Names:

Acid345_2387

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	384 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABF41388.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1IP12 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 81CA86E882D359CD	FASTA	384	40,069
	10 20 30 40 50 60 MTNQLKRSSL VFLLSGKRSA AAAFSLLCVI ITAGCGGGSS GGGTTPPPPA QVATPTVTMT 70 80 90 100 110 120 AAQNGGQVVT MADTTSGASI FFTTDGSTPT STSQQYLTPV LIASNVTIKV VATVSGMTDS 130 140 150 160 170 180 DVTSQSVSGI ASGALVWSDE FSNSSGSNVQ PDASVWTYDT GAGGWGNAEL ETYCAYGSTT 190 200 210 220 230 240 SPCDTALPNT YVGTDGYLHV VARNASGGAY TSARLKTQGL FSTSYGRVEA LIKMPEGQGL 250 260 270 280 290 300 WPAFWMLGNN ITTVNWPACG EHDIMEHINA PLPDWFAGSI HGAGNLNGSV TWPTAAQTYT 310 320 330 340 350 360 ASDWHIYGMI WSKGKVQYYI DDPSNVYASF DSTTITTGTW PFDSDGGAFI ILNMAVGGSW 370 380 PGAPDATTPF PSEMLVDYVR VYAN

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF41388.1.
RefSeq	YP_591462.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IP12.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IP12.
Protein family/group databases
CAZy	GH16. Glycoside Hydrolase Family 16.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4071385.
GenomeReviews	Gene locus Acid345_2387 in contig CP000360_GR.
KEGG	aba:Acid345_2387.
NMPDR	fig|204669.6.peg.2372.
PATRIC	31981808. VBICanKor57425_2541.
Phylogenomic databases
eggNOG	COG2273.
HOGENOM	HBG696112.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR000757. Glyco_hydro_16. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
Pfam	PF00722. Glyco_hydro_16. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1IP12_KORVE

Accession

Primary (citable) accession number: Q1IP12

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)